Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g02945 ATGCAGGGAGGAAAGAAAACAGGAGAATCCATGAAGGAAAAGGTTTCAAACATTGGTGCTTCTGCCAAAGCTGGCATGGAGAAGACCAAGGCCACTGTCCAAGAGAAGGTAGAAAGAATGACAGCACATGATCCGTTGCAAAAGGAATTAGCAACCCAGAAGAAGGAAGAAAAGGTCAACCAGGCTGAGCTGGACAAGCTGGCGGCGCGTGAACATAACGCTGCGGTGAGTGAGCATAACTCGGCGGCGAAACAGGGGGCCACCTACTCCACCACCGGGGAGCATGGTCATCCCACGGGATTCCACCAGATGTCGGCGATGCCAGGTCACGGGACTGGGCAGCCAACGGGCCACGTGACTGAAGGAGTGGTGGGCTCGCATCCCATTGGGACGAATCGAGGCCCGGGAGGCACAGCTACGGCTCGTAATACCCGTGCAGGTGGAAACCCGAATGATTATGGGTATGGGACTGGAGGTAGTTACAGTTAA 489 0.5501 MQGGKKTGESMKEKVSNIGASAKAGMEKTKATVQEKVERMTAHDPLQKELATQKKEEKVNQAELDKLAAREHNAAVSEHNSAAKQGATYSTTGEHGHPTGFHQMSAMPGHGTGQPTGHVTEGVVGSHPIGTNRGPGGTATARNTRAGGNPNDYGYGTGGSYS 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g02945 162 MobiDBLite consensus disorder prediction 29 60 - -
Vimu6g02945 162 MobiDBLite consensus disorder prediction 1 60 - -
Vimu6g02945 162 MobiDBLite consensus disorder prediction 72 162 - -
Vimu6g02945 162 MobiDBLite consensus disorder prediction 78 98 - -
Vimu6g02945 162 PANTHER LATE EMBRYOGENESIS ABUNDANT PROTEIN 6-RELATED 10 137 IPR005513 GO:0009793
Vimu6g02945 162 Pfam Late embryogenesis abundant (LEA) group 1 9 76 IPR005513 GO:0009793
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g02945 Vimu-Chr6 25989278 25989894 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g02945 - - gmx:547828 258.84