Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g02930 ATGGAGAAGATGGAACATTTCAGCCATATCCACCCTCTTCTGTTAAAGCAAGAAAAGATAGATAACAACAACCTAGTCCTTTGCTCAGGTTGTGAAAACCCAATTTCAGGTCCTGTCTTCAGCTGCGACAAATGCAACTATATCCTTCACAAAACATGCGCAGAAATGGCACGCCATGTCAAACACCCATTTCACCCTCAACACCCCCTTGTTCTCCTTTCCACTTCCCCTTATGAGGGACGTTACATATGTGATTCCTGTAGAGGCCTCTTCCGAAACTTCGTGTACCATTGTTATATCTGCAGCTATGACCTTGACGTCTCATGTGCTTCTCAATGCAACCCGGATGATGGCCATAAGCACGAGTTCATGTCAGTGAAAAATCCACAATCGTTTGTTTGTTATGCTTGTGGCTTGCAAGGAGACGAGGGTCTCGCTTGCCTATGCACCATTTGTCAGATTTGGGTTCATTCTAGCTGTGCTGAATTGCCTCTTGCTGTTAGAATAAAAAGCCATGATCACCCTTTGAAGCTCACTTATGACCTTCATCACATTTATGGTTTCTGGGGTAGCATAACTTGCGGTGTTTGTAATGGAGCAATGAGTGCAGCTTTTGCGGGTTACTTTTGTTCAACGTGCAGATTTCCCGTGCATTTGAAGTGTCTACAAGATGAATGGGAGGCCACAGCAGAGGATGAGAAATCATCCACGTACTATGAAACTGAGGAGTCCTTGGATATTGATTTTACTTATAGTTTCTTTGGTCATGAACATTTGTTGAAGTTGAAGGATGAAGAGAGTGATCAGCGATATTCTGGTAAACTCTGTGATGGGTGTAGCCAACCCATCATGCAACCTTTATTTTCTTGTGAAGAAGAAAATTGTGGCTTCATTTTGCACCAAAGTTGTGTTGAATTACCAAGAACAACGCTGCACCCGTTTCATGCACACCCTCTAACTCTTCTCCCCAAGGCACCAAATTATGATGGCATTTATAGGTGCGATGGATGCAAAAGATTGAGCAATGGTTTTGTGTATCGTTGTGATGTGTGTCAATTCGACCTTGATGTTTGTTGTGGTTCTCTTCAAGAGAGAATTGAACATGAAAGTCACATGCATCCCTTGGTCCTCAAGAAGACGACCGTAGCTAGGCAATGCAAAGGTTGTCATCGTTGGTCGAAGCATGTGTATGTGTGTGAAGTTTGTGAGGATTTTGCCATTGATTGTGGATGTGCTACTCTACCGCGTGGAGCATGGTGCATGTACGACAAGCATCCTCTAAGTCTAAACTATTTTGCTGAAGGTTTGAGGGAATATGAATGTGGTATTTGCAATGAGAAAACTTGTCCGAAGCAATGGTTTTATAACTGCGATGACTGTGATTATGGTGCTCATCCTTATTGTGTTGAAGGAAAGTCTAGGCTTGTCAAGTTCGGAGGCAGTTTCCAATATGATGTTCACTCACACCCTCTTGCTTTGGTTGAAGAAACTGATGAAAACACTAAATGTGAAGCCTGTGGTGAATCCTGCAATGGCTGGACACTTGAATGTGGGCAATGCAAAAGCTACTTTCACCGTGAAGGACAGTGTTTTTGGAAACAATTTAAGAAGAGCGCCAAGTATTTGGAGTTGTCAGGAATTACGAGACACAGGTATGCAGCAAACGTGTTAGCCTCCACGCCCAATATATAA 1692 0.4303 MEKMEHFSHIHPLLLKQEKIDNNNLVLCSGCENPISGPVFSCDKCNYILHKTCAEMARHVKHPFHPQHPLVLLSTSPYEGRYICDSCRGLFRNFVYHCYICSYDLDVSCASQCNPDDGHKHEFMSVKNPQSFVCYACGLQGDEGLACLCTICQIWVHSSCAELPLAVRIKSHDHPLKLTYDLHHIYGFWGSITCGVCNGAMSAAFAGYFCSTCRFPVHLKCLQDEWEATAEDEKSSTYYETEESLDIDFTYSFFGHEHLLKLKDEESDQRYSGKLCDGCSQPIMQPLFSCEEENCGFILHQSCVELPRTTLHPFHAHPLTLLPKAPNYDGIYRCDGCKRLSNGFVYRCDVCQFDLDVCCGSLQERIEHESHMHPLVLKKTTVARQCKGCHRWSKHVYVCEVCEDFAIDCGCATLPRGAWCMYDKHPLSLNYFAEGLREYECGICNEKTCPKQWFYNCDDCDYGAHPYCVEGKSRLVKFGGSFQYDVHSHPLALVEETDENTKCEACGESCNGWTLECGQCKSYFHREGQCFWKQFKKSAKYLELSGITRHRYAANVLASTPNI 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g02930 563 SMART PHD_3 27 88 IPR001965 -
Vimu6g02930 563 SMART PHD_3 133 214 IPR001965 -
Vimu6g02930 563 SMART PHD_3 440 507 IPR001965 -
Vimu6g02930 563 SMART PHD_3 275 338 IPR001965 -
Vimu6g02930 563 Pfam C1 domain 7 54 IPR004146 -
Vimu6g02930 563 Pfam C1 domain 313 359 IPR004146 -
Vimu6g02930 563 Pfam C1 domain 424 469 IPR004146 -
Vimu6g02930 563 Pfam C1 domain 63 110 IPR004146 -
Vimu6g02930 563 Pfam C1 domain 170 221 IPR004146 -
Vimu6g02930 563 Pfam C1 domain 255 304 IPR004146 -
Vimu6g02930 563 SUPERFAMILY Cysteine-rich domain 486 526 IPR046349 -
Vimu6g02930 563 PANTHER CYSTEINE/HISTIDINE-RICH C1 DOMAIN FAMILY PROTEIN 3 66 - -
Vimu6g02930 563 SUPERFAMILY Cysteine-rich domain 279 373 IPR046349 -
Vimu6g02930 563 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 12 90 IPR013083 -
Vimu6g02930 563 SUPERFAMILY Cysteine-rich domain 391 475 IPR046349 -
Vimu6g02930 563 SUPERFAMILY Cysteine-rich domain 31 111 IPR046349 -
Vimu6g02930 563 SUPERFAMILY Cysteine-rich domain 145 222 IPR046349 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g02930 - - vun:114181199 1135.94