Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g02927 ATGAGGGAAACAGCACCACCTCATAACAATGCTGCAATATATAGTATATACACCAGACACAAAGATGGACAAGTTCAATCCTTCAAGTACTTTCACAAAAAAGAGAACATGGGATCAGCACAGGAGGACCCCAATGTTTTCCACTTTAGCCATCCACATCCTTTGCAATGCATCACCCTACCCTCCGCATCAAATATTCTAACATGCTTTGGATGCAACATCAAAATTAACTCTGGTGAAGACTATTACCAGTGCAAAACATGTTCTTTTTCTCTTCACCATGTCTGCTACAACATGCCCTTAATCACCAACCACCCTTCACATCCAACCCACCATCTACTCCTCCTTCCTCTACCTTCCACCAAACCCACTCTCAACTGTCTCGCATGTGGCCACCATGTCACCGCCTTTTCCTACCACTGTGCTCAATGCGCCATCTCCTTCCATGCCTTCTGTCTTGCACTCCCTCTGTCCCTCGCAATCCCATCCCATCCCCACAAAATCAACCTTCACTTTTCACCACCCCATGACTTCTTCTGTGACTTGTGCAACCACCCCAGTAATAACAACCACCGCTGGCTCTATAGATGCAACATGTGTGAATTCGACACACATATAGCTTGTGCCCTTGAAAACCTACAACCCCGTCTCTTTCAATCAAGCCCTCTGTTACGCCAACTTACCAGTCACCAAGTGGAGCACACAAAATTCAGTGCAAGTTTAGCTGATAGTTTCAAAGGGTATCAGTATGGGATCATGAGTTTGGTGGCGGAGCAGATTGGAGGGGGACCCAGAGAAAATTTTTATAGTAAAACCGCTGGATGGAACAAGAGATTGTACAGTAGTCCAAGGAAAAAGCATGACAGAGCTGAGAGTGAGAAGATGAAGAATGCTGAACTTGAATTACTGGGAAAAGAACTAAGCCCTGCCGAACTTTTATCAAAATTAGAAGAAAGAACACCACTTCGGGATAAATGGACTCCACTTTCTGATCATTCACAGTTTAGTTACCAATACAGCGACTCATACTTTTCAATAGATTTGGCAAAGTCATATTCAACCCATTCAGTTAGAAGTCAAGTTGAAAAAGATGGTGGTAGTGACCAGATAACACGAGCTCCTACTAACTTTGTAAGCAATTCCGTTCCAGTTAATAATAAGCTGAATGCAGATGTTTTGATGAAAGAAGGACGAACTAGTGATGTTGGGAAATCAGACCGGAGAGTTATGATGAAAAATGCTAACGAAAGCCACGCTAAACGGTCTGTTCATGACCACACAATATCGGAGACAGTAAGTTCCAATGAACTAGTACTCTATAGTACCTTTTATTTCTTCAGCCTCCACGCTTCAAAATAG 1359 0.4312 MRETAPPHNNAAIYSIYTRHKDGQVQSFKYFHKKENMGSAQEDPNVFHFSHPHPLQCITLPSASNILTCFGCNIKINSGEDYYQCKTCSFSLHHVCYNMPLITNHPSHPTHHLLLLPLPSTKPTLNCLACGHHVTAFSYHCAQCAISFHAFCLALPLSLAIPSHPHKINLHFSPPHDFFCDLCNHPSNNNHRWLYRCNMCEFDTHIACALENLQPRLFQSSPLLRQLTSHQVEHTKFSASLADSFKGYQYGIMSLVAEQIGGGPRENFYSKTAGWNKRLYSSPRKKHDRAESEKMKNAELELLGKELSPAELLSKLEERTPLRDKWTPLSDHSQFSYQYSDSYFSIDLAKSYSTHSVRSQVEKDGGSDQITRAPTNFVSNSVPVNNKLNADVLMKEGRTSDVGKSDRRVMMKNANESHAKRSVHDHTISETVSSNELVLYSTFYFFSLHASK 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g02927 452 SUPERFAMILY Cysteine-rich domain 79 166 IPR046349 -
Vimu6g02927 452 Pfam C1 domain 162 209 IPR004146 -
Vimu6g02927 452 Pfam C1 domain 49 96 IPR004146 -
Vimu6g02927 452 Pfam C1 domain 106 152 IPR004146 -
Vimu6g02927 452 PANTHER PHORBOL-ESTER/DAG-TYPE DOMAIN-CONTAINING PROTEIN 47 312 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g02927 Vimu-Chr6 25898577 25899935 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g02927 - - vum:124830470 685.641
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g02927 6 25898577 25899935 Vimu6g02927 6 25898577 25899935 ECH