Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g02918 ATGTCTGTAATAGGGGCGTGTTCACAGTTTGTTTACGGAGAGGTTTATCAGAGAGATGAACAGTGGGCACAGTGCTTGGTGAGTGGGAGAGGGTATCTGTTTTGTCACAGGAGTGGTGGGTGTGAGAACATATGGGTTGGAAGCAGAAAGAGAGAAAGGAAGATGAAAGGGAGAAATTTTCGCGTGGAAGCTATGTGGCCAGATTTGTCAAGACCAAGTGAAGTTGAGATGGAAGAAATCACTGATTCCGACCACCTCGATCAAATTCTTCTTCTTGCCCACGACAACTCACAACCTATCCTCATTGATTGGATGGCTACTTGGTGTCGGAAATGCATCTATTTGAAGCCCAAGTTGGAAAAATTAGCAGCTGAATATCTCAACAAAGTCAAATTTTATTACGTGGATGTGAATAAAGTACCCCAGACTCTAGTTAAGAGAGGCAACATATCTAAAATGCCAACAATTCAGGAAAATAAAAGAGAAAACATGAATTGTTTGCAGCTGTGGAAAGATGGAGAGATGAAGGCAGAAGTGATTGGAGGCCATAAGGCCTGGCTAGTTACTGAAGAAGTCAGAGAAATGATCCAAAAATTCTTGTGA 603 0.4212 MSVIGACSQFVYGEVYQRDEQWAQCLVSGRGYLFCHRSGGCENIWVGSRKRERKMKGRNFRVEAMWPDLSRPSEVEMEEITDSDHLDQILLLAHDNSQPILIDWMATWCRKCIYLKPKLEKLAAEYLNKVKFYYVDVNKVPQTLVKRGNISKMPTIQENKRENMNCLQLWKDGEMKAEVIGGHKAWLVTEEVREMIQKFL 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g02918 200 Gene3D Glutaredoxin 69 199 - -
Vimu6g02918 200 CDD TRX_family 84 197 - -
Vimu6g02918 200 FunFam Thioredoxin 73 200 - -
Vimu6g02918 200 SUPERFAMILY Thioredoxin-like 76 196 IPR036249 -
Vimu6g02918 200 ProSiteProfiles Thioredoxin domain profile. 60 200 IPR013766 -
Vimu6g02918 200 Pfam Thioredoxin 95 158 IPR013766 -
Vimu6g02918 200 PANTHER THIOREDOXIN-LIKE 3-2, CHLOROPLASTIC 44 199 IPR044253 GO:0009570
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g02918 Vimu-Chr6 25784771 25785947 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g02918 - - gmx:100811965 308.531
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g02918 6 25784771 25785947 Vimu6g02918 6 25784771 25785947 ECH