Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g02914 ATGGAGGAAGAAGAAGACCAGCAGAAGCTTCCAGATCTGGTGAAGGAGCTAGTTCACCGCTTGCTCTCCCAAAACCTCCCATCCAATTCCCCGCCTCTAAACCCTAACTCCCCCGAATTCCGCAACTCTCTCCGCTACGCCCTCCGCATCCTCTCCAGCCGCCTCACTCCCTCCGTCGCTCCCGACGCAGCAGCCATCGCCGACTCCATCAAGCGCCGCCTCGCCACTCACGCTCGTTCCGCGGACGCCCTCTCCTTTGCCGACCTCTTCTCCAAATTCGCATCCAAAGCCCAAAGCGTCAACAACAAATGGGCCGTCATCTACCTCCTAAAAATCATCTCCGAAGATCGCCACAAGACCGCCGCCATCCCCGCCACCACCACACCTCTCTTGCCCAACCTCGCTTTCTCCCAACCCGCTTCCAACAACGGCTGGAGCAACGGCGTTTTACTCGTCTCCAAGGATCCCGAGAACCGCCGCGAAGTCGCGTTTCGGGAGTTCGTGAATTTGGTCAAGGAAGAAAACGAGGTGTTGGAAGAGGTTATCGTCAGGGACGTGCTCTATGCTTGCCAGGGGGTCGATGGTAGGTTTGTGAAATTTGAGAGTGATAGTAAGCGTTATGTGATACCCGATTCGGTTAGGGTTCCGAGAGCCACTAGGAGTATGGTTCATAACCTTTGTGAATTGGGTGGTTTGTTTCGGAAGGTTAGTGGTTACATTTCGCAGAGTATGGATCGGTTTCCCAATGAAGATGTGGGAACCGTGGGACAAGCTTTTTGTTCCGCTTTGCAGGATGAGCTTAGTGAGTACTACAAGTTGTTGGCGGTTCTTGAGGCTCAGGCTTCGAACCCGATTCCTTTGGTGTCCGAATCTGCGAGTTCTGGGAACTATCTATCGCTGAGGAGATTAGCGGTTTGGTTGGCTGAGCCAATGGTGAAGATGAGGCTGATGGCGGATTTGGTTGAGAAGTGTAGGGTTTTGCGCGGTGGGGCTATGGCGGGGGCGATTCATTTGCACGCACAGCATGGTGATCCGATGGTTCATGAGTTTATGAGGAGGTTGTTGCAGAGAGTGTGTTCTTCGCTGTTTGAGATGGTGAGGAGGTGGGTTTTGGAAGGGGAGTTGGAGGATATATTTTCTGAGTTTTTCATTGTTGGGCAGCCTGTTAAAGCTGAATCACTTTGGAGAGAAGGGTATAGGCTTCACCATGCGATGCTTCCTTCGTTCATTCCGCCTTCACTTGCGCAGAGGATCTTGAGGACTGGCAAGTCGATTAATTTTCTTCGCGTTTGTTGTGAGGATCGCGGTTGGGCGGATGCTGCGACTGAGGTTATCACTGATAATGAAGTGACAGCAAGAAGAGGTGGTTTTGGGTATGGGGAAACCGATACCCTTGAGTTATTGGTAGATAAAGCTGCAAAAAGGATCGACAAGCATTTGTTGGATGTGATTTTCAAGAGGTACAAGTTCAAAGAACACTGTCTTGCAATTAAGCAGTATTTGTTACTTGGCCAAGGTGATTTTGTGCAGTATCTTATGGATATTGTGGGACCTGACCTTTCTGAGCCAGCTAACACTATTAGCTCTTTCAAACTTTCGGGATTGCTGGAAACCGCAATTAGAGCATCTAATGCTCAGTATGAGGATCCTGACATTTTGGATAGGCTCAGGGTTAAAATGATGCCGCATGAGAGCGGTGATAGAGGCTGGGATGTATTTTCGTTGGAATATGATGCAAGGGTTCCACTTGATACAGTCTTCACAGAGTCTGTGATGGCAAGGTATTTAAGAATTTTTAATTTTCTTTGGAAGCTTAAAAGAGTGGAACATGCGCTTACTGGTGCCTGGAAAACCATGAAACCAAACTGCATTACTTCTAATTCCTTTACCAGATTGCAACATGCAGTAAAGATGCAGTTAGTTTCAACATTGAGGCGCTGTCAGGTTCTTTGGGTTGAAATTAATCACTTCATTTCAAACTTACAATATTATATAATGTTTGAAGTGCTGGAGATATCATGGTCAAATTTTTTAGCGGAGATTGAAGTAGCCAAGGATCTTGATGATCTACTTGCTGCTCATGAGAAATATCTACACTCTATAGTAGAGAAATCTCTCCTTGGAGACCTTTCCCAGTCTCTTTACAAGTCACTACTTGTAATATTTGATCTTATATTACGTTTTCGGAGCCGTGCTGATCGATTGTATGAAGGTATTCATGAGTTACAAGCAAGGTATTCATCTTTTTAA 2250 0.4716 MEEEEDQQKLPDLVKELVHRLLSQNLPSNSPPLNPNSPEFRNSLRYALRILSSRLTPSVAPDAAAIADSIKRRLATHARSADALSFADLFSKFASKAQSVNNKWAVIYLLKIISEDRHKTAAIPATTTPLLPNLAFSQPASNNGWSNGVLLVSKDPENRREVAFREFVNLVKEENEVLEEVIVRDVLYACQGVDGRFVKFESDSKRYVIPDSVRVPRATRSMVHNLCELGGLFRKVSGYISQSMDRFPNEDVGTVGQAFCSALQDELSEYYKLLAVLEAQASNPIPLVSESASSGNYLSLRRLAVWLAEPMVKMRLMADLVEKCRVLRGGAMAGAIHLHAQHGDPMVHEFMRRLLQRVCSSLFEMVRRWVLEGELEDIFSEFFIVGQPVKAESLWREGYRLHHAMLPSFIPPSLAQRILRTGKSINFLRVCCEDRGWADAATEVITDNEVTARRGGFGYGETDTLELLVDKAAKRIDKHLLDVIFKRYKFKEHCLAIKQYLLLGQGDFVQYLMDIVGPDLSEPANTISSFKLSGLLETAIRASNAQYEDPDILDRLRVKMMPHESGDRGWDVFSLEYDARVPLDTVFTESVMARYLRIFNFLWKLKRVEHALTGAWKTMKPNCITSNSFTRLQHAVKMQLVSTLRRCQVLWVEINHFISNLQYYIMFEVLEISWSNFLAEIEVAKDLDDLLAAHEKYLHSIVEKSLLGDLSQSLYKSLLVIFDLILRFRSRADRLYEGIHELQARYSSF 749
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g02914 749 Coils Coil 260 280 - -
Vimu6g02914 749 PANTHER GAMMA TUBULIN COMPLEX PROTEIN 11 737 IPR007259 GO:0000226|GO:0000922|GO:0005815|GO:0007020|GO:0043015
Vimu6g02914 749 FunFam Gamma-tubulin complex component 491 748 - -
Vimu6g02914 749 Gene3D - 491 749 IPR042241 -
Vimu6g02914 749 Pfam Gamma tubulin complex component N-terminal 183 486 IPR041470 -
Vimu6g02914 749 Pfam Gamma tubulin complex component C-terminal 492 741 IPR040457 GO:0043015
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g02914 Vimu-Chr6 25770856 25773105 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g02914 K16570 - gmx:100784710 1326.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g02914 6 25770856 25773105 Vimu6g02914 6 25770856 25773105 ECH