Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g02901 ATGGCCAACTCAACCATTTTCCTTTGCCTTAACCTCTCTTTACTAATATCTCTCGTCACCGCCACTTACTATCAAAGCCTAACCCCAACTCTAATGGGTTTCCGTGAGGACAAGTTCACTCATCTTCACTTCTTCTTCCACGACGTAGTCACCGGGCCCAACCCCAGCATGGTCATTGTCGCCGAGCCCAACGGAAAAGCCAAGGATGCCCTTCCCTTCGGCACCGTCGTCGCCATGGACGACCCCTTGACTGCCGGACCCGAACCCGACTCCAAACTCGTGGGGAAGGCCCAGGGGATTTACACTTCTATATCTCAGGCTGAGATGGGGCTTATGATGGTTATGACCATGGCCTTCACCGACGGAGACTTCAACGGCAGCAGCATAAGCGTGTTGGCCAGAAACATGATCATGAGCGAACCTGTTAGGGAAATGGCCATTGTTGGCGGCACTGGCGCTTTTCGCTTCGCTCGTGGCTACGCTCAGGCCAGGTTCCACTCCGTCGATTTCTCCAAAGGCGATGCCATCGTTGAATACGACGTCTTCGTCAATCATTATTGA 561 0.5312 MANSTIFLCLNLSLLISLVTATYYQSLTPTLMGFREDKFTHLHFFFHDVVTGPNPSMVIVAEPNGKAKDALPFGTVVAMDDPLTAGPEPDSKLVGKAQGIYTSISQAEMGLMMVMTMAFTDGDFNGSSISVLARNMIMSEPVREMAIVGGTGAFRFARGYAQARFHSVDFSKGDAIVEYDVFVNHY 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g02901 186 PANTHER NUCLEOPORIN-RELATED 18 182 IPR004265 -
Vimu6g02901 186 Pfam Dirigent-like protein 40 183 IPR004265 -
Vimu6g02901 186 Gene3D - 32 173 IPR044859 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g02901 Vimu-Chr6 25565111 25565671 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g02901 - K25075 gmx:100500621 336.265
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g02901 6 25565111 25565671 Vimu6g02901 6 25565111 25565671 ECH