Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g02873 ATGAGAGGAATACAGTTACCGTTAAGCAAAACTCAGAAGGTTCGTCTTCAGAAGACTCTAGAACAGTTAGAATCTCTATCATCCAAGGTCAATTCCGATGCTTCCGTCATCATCGCTGATTCCATTCCCGTCAACCACGAAGACGGAGTCCTCAAGGGACACGGAACCGCCGATCTCAACGGCGAAGTCGTTGCCACCCTCTGCGGCGTCGTTGAGCGTGTCAACAAACTTGTCTACGTCCGCGCGTTACGCTCCAGGTATAAGCCTGAGGTTGGTGACATTGTTATAGGACGTGTTGCTGAGGTTGCTCAGAAGCGATGGAGACTGGATATAAATTTCAATCAGGATGCAGTTTTGATGCTTTCTTCTATGAATATGCCTGACGGGGTCCAGAGGCGGAGGACAGCGCTGGATGAGCTAAACATGCGTTGTATTTTTGAGGAGAATGATGTTGTCTGTGCTGAAGTTCGGGGTTTCCAGCATGACGGCTTACACCTTCAAGCAAGGAGTCGGAAATATGGAAAGCTTAATAGAGGTCAGCTGCTGACAGTCCCACCTTATCTAGTGAAGAGACAGAAACAACATTTCCATCATCTGGAGGAGTTTGGTGTTGATTTGATACTTGGCTGTAACGGATTCATATGGGTTGGGGAACATATTGAAGCCAAAGATGACATGGTAGAAGATCAGGTGAGCCAATCCGATCCACAAGTTTTACTGCATAACAGCGCAAGTCTTGAAGAACAAGAAAAAAATTATACGATATTGGACATCAGAAAATACATTTGCAGAGCAGCTAATGCTGTTAGAGTTCTATCAGTCTTAGGCTTCAATATTACATTGGAAATCATCAAGGGAATTATTGATCTAAGCCTATCTATGAATCTTGATATACATGAGATGCTTGGTTCTGAATTCTGTGTTCTGGTTGCTGAAAAAGAGGCAGAAAGGAGGAGCTCAAATAAAAAGAAGCGGTAG 978 0.4427 MRGIQLPLSKTQKVRLQKTLEQLESLSSKVNSDASVIIADSIPVNHEDGVLKGHGTADLNGEVVATLCGVVERVNKLVYVRALRSRYKPEVGDIVIGRVAEVAQKRWRLDINFNQDAVLMLSSMNMPDGVQRRRTALDELNMRCIFEENDVVCAEVRGFQHDGLHLQARSRKYGKLNRGQLLTVPPYLVKRQKQHFHHLEEFGVDLILGCNGFIWVGEHIEAKDDMVEDQVSQSDPQVLLHNSASLEEQEKNYTILDIRKYICRAANAVRVLSVLGFNITLEIIKGIIDLSLSMNLDIHEMLGSEFCVLVAEKEAERRSSNKKKR 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g02873 325 FunFam Exosome complex component RRP4 87 177 - -
Vimu6g02873 325 SUPERFAMILY Ribosomal L27 protein-like 44 82 - -
Vimu6g02873 325 CDD KH-I_Rrp4_eukar 179 315 - -
Vimu6g02873 325 SUPERFAMILY Nucleic acid-binding proteins 85 176 IPR012340 -
Vimu6g02873 325 PANTHER PNAS-3 RELATED 32 317 IPR026699 GO:0000178|GO:0003723
Vimu6g02873 325 Gene3D - 36 87 - -
Vimu6g02873 325 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 179 320 IPR036612 GO:0003723
Vimu6g02873 325 Gene3D - 88 177 IPR012340 -
Vimu6g02873 325 CDD S1_Rrp4 86 176 - -
Vimu6g02873 325 Pfam KH domain 179 219 IPR004088 GO:0003723
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g02873 K03679 - gmx:100776358 591.267
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g02873 6 25363858 25365644 Vimu6g02873 6 25363858 25365644 ECH