Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g02859 ATGAAATCAATTGATGATGCTCTTCAGCTTTCTCAAGTATACGGTCAAAAGTTGTGGGAGCCTGGAATTGTTCTAGTTGAATTTGTCTTTTCAGTCGTATGGCAGTTACTTGAAGCATCATTACATGACGAAGGGTTACTAGATCACACTACAGAGAATAAGCCTATATGGCTATGCAGGTCACATGACATGGATATTGATGGACATGACATCACAGGCGAAAAGAAAACTGAGGATGTTGAGGGGTTTCAGAAGAAAAATACAGCAATGGCTATAGAGATTATTGCAGAATTTTTGCAACACAAAATGACTTCAAGGATCCTTTCCTTAGTTCATTGGAACATGCCATCATATTGGAAATCTTTCGTTCACCAAACACAGCTGCTTGTGTCAAACTCTCCAATTTTAAGGAATTTGAGAAATAATACCGTAGACAGCCTTATGAGTTTGACGGAAAATATCCATGCGGTTGTTTCTCATGAATTCAAAATAAAATCTAAGGTGAGGACTAAAGAAGTCATATGTGGTGGTTCGCCCATGTCTTTTGCTGCGCAGTCTTCTGGGGATAGTTGGTCTGCACTCTGGCTTCCTATTGATCTTATTCTTGAAGATGCTTTGGATGGAGGGCAAGTGGCAGCTTTTAGTGCTATCGAGATTATTACAGGTTTGGTGAAGACTTTACACGTTGTTAATGGCACTATGTGGCACAGCACATTTTTGGGGCTATGGGTTGCAGCATTGCGTTTGGTTCAAAGGGTTGGAACTGTTCCAACAAAAAGGGAGAGAGATTCAAAAGAAGGTCCTATACCTCGTCTTGATACCTGCATGTGTATGCTACTGAGCATTACAACCCTCGTGGTTACTTGTATTATAGAAGAAGAGGAAGGTCAACTGATTGAAGAAGCTGAACATAGCCCTACAACAAGCAAAGGGACAGAAAAACCAGCTCTGGGGAAGTGTCGCGGGGAATTGATTACCAGTTTACAGCTATTGGGTGATTATGAGTCCTTACTCACTCCACCTCAGCCTGTTCTTGAGGAAGCCAATCAGGCTGCTGCCAAAGCTATTTTGTTCTTATCAGGAAACCCTGTTGGTAGTGGATACATGGAATATACAAACGGCTTGCCGATAAAATATTATTTCTTTTTGGCGGCAGAATTTGTACTTCTAACTGATAGGTATGCTTCTATGATTCTGTTGCTTCCCCAAATGGGTCTCCCTGTGAACATACAAAACCTACTTGATGCATCAGCTTATCTATGGCCTGGCTATGTGAGTGAATGCAGCAATCAAATTCCTTGTAGCATTTCTAATCATGTCCCTGGCTGGTCTTCTTTGATGGAGGGATCACAGCTAACTCCTGAATTGGTTAATGTCTTAGTTGCAACTCCAGCTTGCAGGCAACTGAATTTCATGGATTTTGATGTAAGCTTAGCAGAGATTGAGAAAATATATGAAATTGCAATCAATGGTTCAGATGAAGACAAGATATCTGCTGCTACCATTATGTGTGGGGCATCTCTGGGACGTGGGTGGAATGTACAGGAGCTTACCCTTCTTTTTATCACAAAATTGCTTTCGCCTATAGATCCTCCCAATTACTCTGGGGCTGAGAGCCATTTGATCAGTCAAGCTGCCTTTTTAAACGTTCTACTTTTGGGAATCTCATCTGTAGACTGTGTTCATATATTCTCCCTACATGGTTTGGTTCCATTACTTGCGGCAGGACTAATGCTAATAAGTGAGGTTTTTGGATCACGTGTTCCCGATGCCTCGGGGACTGTTGCAGCCGGAGAAAAACTCACTCATTGGGAGGTATTCTCTAATGCATTTACTCTTTTGCTGAGATTTTGGCGGTTTGATCGTCTACCTGTTGAACAAGTGAGAAGCGATGCAACAGCGCCAACATTTGGATCACTACTTAGTCCTGAATGCCTTTTATTAGTTCGAAACAGTAAATTGGCGTCGCTTGGAAGAACAGCAAAGGACCAGAAAATGCTCAAAAGATGGTCAAACATTTTAAGCTTTCCTGCAGACCCTGTATTTATGGATTTCTTCCCAAAATTAAACTACTGGTACCGGAAACATCAAGAAAGCATGGCTTCTACCCGCTCGGGTCTTGTGCCTGGAGGGCCTGTTCATCGGATCGTCGATGCCCTACTAAGCATGATGTTTTCGAAGGTAAGTAATGGAGCCGAACCTTCGACACCTACAACTTCAGGAAACAACTGTTCATCTGGGCTTGCATTCGATGATGCTTTAAAAGTGCCTGCCTGGGATATCCTCGAAGCTATTCCCTTTGTCCTGGATGCTTCGCTGACATCCTGCGCTTATGGGAAACTCTCTACCCGTGACCTAGCAACAGGTCTCAAAGATCTAGCTGATTTCCTTCCGGCTTCTTTGGTTACCATTGCAAGCTATTTTTCAGCTGAAGTTACGAGGGGCGTATGGAAGCCAGCATTAATGAATGGAACTGACTGGCCCAGCCCTGCCTCAAATTTATCCCTTGTTCAACAAGAAATAAAGAACATCTTAGTAGATTTCAATGTCCCAAGCCTTGATATAGATGGAAAGTCTCCACCCACACTTCCTTTGCCTTTGGCAGCTTTTGTAAGCCTCACGATAACATATAAACTTGACAAGGCCACTGAACGTTTCCTTGCCCTGATTGCCCCTACCGTGACTGCCCTTGCTTCTGCTTGCCCCTGGCCCTCCTTGCCCATTGTGACGTCTTTGTGGGTCCAGAAGGTGAAGCGTTGGAGTAACTATTTTGTGCTCTCTGCTTCCAGCACTGTTTTCCACCACAACAGGGATTCTGTAGTTCAACTACTAAAAAGTTGCTTCACGTCCACCCTTGGCCTTGGCTCTGCCTGCATTTATAATAATGGCGGTGTCGGTGCCCTTCTTGGTCATGGCTTAGTTCCCCAAATATCCGATGGGATCTTTCCAGTTGCTCCAGGAATTCTTTACCTAAGAGTGTATCGGTCTATTGGAGATATCGCGTTATTGATTGAAGAAATTGTGCCTATTCTAATGCTTTCGGTTAGAGACATAGCGAGTGATTTGTCCAAGGGGGGTATAAGGAAATCAAAGAAAACCAAGTTTGGGATCAAATATGGCCAAGTTTCTCTGGCCAGATCCATGGCACGTGTGGAGCATGCCGCTCTACTCGGCGCTTCATTGGTTTGGATATCAGGTGGACCAAAGTTCGTTCAATATTTGATAAGTGAGACTCTGCCTTACTGGTTTTTATCAACTTCCATGTTGGAGCAGGGTGGTGGAGAATCTGGAGTTATGGTTGCCATGCTCAAAGGTTATGCACTGGCATTTTTTGTCTTCCTTAGCATATCATTTTCCTGGGGTATTGACAACTCGCATCAACCTAAACGACTGACGAAAGTCATTGGGTTGCATATGGAATTTCTTGAGAGTGCCCTGAACAAGACTACATCAATGCGTTGTCATAGTGCTACTTGGGAGGCCTATGTTTCATGGTTTGTCAGCTTGATGGTGAGCCGAGCTCCGTCGTGGATTCAGGAAGCTGACGAGGATTTGCTCAAGAGACTGAGCAAGGGACTAAGACGTATGGATGAACACGAGTTGGCTCTTCGCCTGTTGGAAATTGGAGGGATACGTGTGATGGGCGCAGCAGCTGAAATGATAATTGAATTTAAACGTACCTGA 3684 0.4381 MKSIDDALQLSQVYGQKLWEPGIVLVEFVFSVVWQLLEASLHDEGLLDHTTENKPIWLCRSHDMDIDGHDITGEKKTEDVEGFQKKNTAMAIEIIAEFLQHKMTSRILSLVHWNMPSYWKSFVHQTQLLVSNSPILRNLRNNTVDSLMSLTENIHAVVSHEFKIKSKVRTKEVICGGSPMSFAAQSSGDSWSALWLPIDLILEDALDGGQVAAFSAIEIITGLVKTLHVVNGTMWHSTFLGLWVAALRLVQRVGTVPTKRERDSKEGPIPRLDTCMCMLLSITTLVVTCIIEEEEGQLIEEAEHSPTTSKGTEKPALGKCRGELITSLQLLGDYESLLTPPQPVLEEANQAAAKAILFLSGNPVGSGYMEYTNGLPIKYYFFLAAEFVLLTDRYASMILLLPQMGLPVNIQNLLDASAYLWPGYVSECSNQIPCSISNHVPGWSSLMEGSQLTPELVNVLVATPACRQLNFMDFDVSLAEIEKIYEIAINGSDEDKISAATIMCGASLGRGWNVQELTLLFITKLLSPIDPPNYSGAESHLISQAAFLNVLLLGISSVDCVHIFSLHGLVPLLAAGLMLISEVFGSRVPDASGTVAAGEKLTHWEVFSNAFTLLLRFWRFDRLPVEQVRSDATAPTFGSLLSPECLLLVRNSKLASLGRTAKDQKMLKRWSNILSFPADPVFMDFFPKLNYWYRKHQESMASTRSGLVPGGPVHRIVDALLSMMFSKVSNGAEPSTPTTSGNNCSSGLAFDDALKVPAWDILEAIPFVLDASLTSCAYGKLSTRDLATGLKDLADFLPASLVTIASYFSAEVTRGVWKPALMNGTDWPSPASNLSLVQQEIKNILVDFNVPSLDIDGKSPPTLPLPLAAFVSLTITYKLDKATERFLALIAPTVTALASACPWPSLPIVTSLWVQKVKRWSNYFVLSASSTVFHHNRDSVVQLLKSCFTSTLGLGSACIYNNGGVGALLGHGLVPQISDGIFPVAPGILYLRVYRSIGDIALLIEEIVPILMLSVRDIASDLSKGGIRKSKKTKFGIKYGQVSLARSMARVEHAALLGASLVWISGGPKFVQYLISETLPYWFLSTSMLEQGGGESGVMVAMLKGYALAFFVFLSISFSWGIDNSHQPKRLTKVIGLHMEFLESALNKTTSMRCHSATWEAYVSWFVSLMVSRAPSWIQEADEDLLKRLSKGLRRMDEHELALRLLEIGGIRVMGAAAEMIIEFKRT 1227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g02859 1227 PANTHER OS07G0681500 PROTEIN 1 1223 IPR039638 GO:0016592|GO:2000762
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g02859 Vimu-Chr6 25266723 25276314 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g02859 - - pvu:PHAVU_001G148600g 2062.34
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g02859 6 25266723 25276314 Vimu6g02859 6 25266723 25276314 ECH