Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g02851 ATGTTGCATGAGCAGAGGGTGGGTTTGATGGATTTTCGACCAGGGAATTTCGTCTACGATGCTGAGGATATTCCATTTGGGACTCTCTGGTGGTTCATTTATGCTGGTGTTTCTTGCTTGCTTGTTCTCTTCGCTGGGATTATGTCTGGTCTCACTCTTGGATTAATGTCTCTGGGTCTCGTTGACCTTGAGATTCTCCAGCAGAGTGGTTCCTCCACCGAGAAGAAACAAGCTGCTGCTATTTTGCCGGTTGTTCAGAAGCAGCATCAGTTGCTTGTTACCTTGCTCCTTTGTAACGCCTGTGCCATGGAGGCACTTCCAATTTACCTTGACAAAATTTTTCATCCGTTTGTAGCAGTACTGTTATCTGTGACTTTTGTTCTCGCTTTTGGAGAGGTTATCCCACAAGCTATATGCACGAGATATGGGCTCTATGTTGGTGCTAATTTTGTGGGACTCGTACGTGTTCTGATGATCATCTGTTATCCTATTGCTTTTCCTATTGGAAAGGTTCTGGATGTTTTACTTGGTCATAGTCATGCATTATTTAGACGAGCACAGTTGAAAGCCCTTGTCTCAATCCATAGCCAAGAGGCTGGTAAAGGAGGTGAACTCACTCATGACGAGGCAACAATTATCAGCGGAGCATTAGATCTCACGGAGAAGACTGCTGAGGAGGCCATGACACCAATAGAATCTACATTTTCCTTGGATGTGGCTTCCAAATTGGACTGGGAAGCAATTGGGAAAATTCTTTCACGAGGCCATAGTCGTGTTCCTGTATACAGTGGAAACCCCAAAAATATAATTGGCCTCTTACTAGTGAAGAACCTTCTTACTGTAAGAGCTGAAACAGAGACCCCGGTCAGTGCTGTTTCCATCCGGAGAATTCCAAGAGTTCCAGCAGATATGCCTCTATATGATATCCTCAACGAGTTTCAAAAAGGAAGCAGTCATATGGCAGCTGTAGTCAAGGTTACACGAGAGACAAAGTACCCTCTGGCAACTGGTAACATTGAGAAATCCAAGGATGAAGAAGTCATAAAGCAGAGTTCTCAACTAACTATTCCATTACTAGCCAGGTTTTACGAGAAATCAGAAAAGGTTGTCAATATTGACAAACTCTCTAAGCATGCTGCAGAACAACAATTTCAGAAGGGTGTCACAGCAACAAATGGCTCCCACCACTCTCTTGACAATGTTGACGATGGGGATGAAGTTATTGGCATCATTACCTTGGAAGACGTGTTTGAAGAACTCCTTCAGGAAGAAATTGTGGACGAGACTGATGTGTATGTTGATGTACATAGAAGAATACGTGTGGCTGCTGTAGCAGCTGCTACATCTGTGGCACGGGTTCCTTCTGGCCGAAAGTTGGCAGGTCAAAAGCCTATAGCAATTCAGAATCAGGTTTATGGTTTCTATCTCTCTGAACTTTAG 1440 0.4389 MLHEQRVGLMDFRPGNFVYDAEDIPFGTLWWFIYAGVSCLLVLFAGIMSGLTLGLMSLGLVDLEILQQSGSSTEKKQAAAILPVVQKQHQLLVTLLLCNACAMEALPIYLDKIFHPFVAVLLSVTFVLAFGEVIPQAICTRYGLYVGANFVGLVRVLMIICYPIAFPIGKVLDVLLGHSHALFRRAQLKALVSIHSQEAGKGGELTHDEATIISGALDLTEKTAEEAMTPIESTFSLDVASKLDWEAIGKILSRGHSRVPVYSGNPKNIIGLLLVKNLLTVRAETETPVSAVSIRRIPRVPADMPLYDILNEFQKGSSHMAAVVKVTRETKYPLATGNIEKSKDEEVIKQSSQLTIPLLARFYEKSEKVVNIDKLSKHAAEQQFQKGVTATNGSHHSLDNVDDGDEVIGIITLEDVFEELLQEEIVDETDVYVDVHRRIRVAAVAAATSVARVPSGRKLAGQKPIAIQNQVYGFYLSEL 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g02851 479 Gene3D - 340 428 IPR046342 -
Vimu6g02851 479 ProSiteProfiles CNNM transmembrane domain profile. 27 209 IPR002550 -
Vimu6g02851 479 Pfam Cyclin M transmembrane N-terminal domain 38 208 IPR002550 -
Vimu6g02851 479 SUPERFAMILY CBS-domain pair 213 422 IPR046342 -
Vimu6g02851 479 CDD CBS_pair_CorC_HlyC_assoc 223 324 IPR044751 -
Vimu6g02851 479 PANTHER METAL TRANSPORTER CNNM 17 447 IPR045095 GO:0010960
Vimu6g02851 479 FunFam DUF21 domain-containing protein At4g14240-like 209 346 - -
Vimu6g02851 479 Gene3D - 209 339 IPR046342 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g02851 Vimu-Chr6 25203986 25209183 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g02851 K16302 - gmx:100777230 789.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g02851 6 25203986 25209183 Vimu6g02851 6 25203986 25209183 ECH