Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g02791 AAACAAGTTCCTCTTTCCGGTGTAAAAATGTCGTCGTTACTAGTAGATTTGCTCCGCCAAAGTGGCGGCACCGCCGTCATCGACGGTGGTCTTGCGACGGAGCTGGAGCGCCATGGTGCGGACCTCAACGATCCCTTATGGAGTGCCAAATGCCTCTTTTCCTCTCCTCACCTCATTCGCCAGGTGCACCTTGATTATCTGGAAAATGGGGCTGACATTATAATCACAGCGTCTTATCAAGCCACCATTCAAGGTTTTAAAGAAAAAGGCTATACTGATGAAGAGAGTGAAGCCATGCTCAGAAGGAGTGTTGAAATTGCTCGCGAGGCGCGGGAATTGTACTATAAAAGATGCTCTGAATGCTGTTCTGGTGATAAGGCTGAGGGTAAAATCCTCAAACAACGGCCTATCCTGATTGCTGCGTCAGTGGGGAGCTATGGAGCTTATTTAGCCGACGGATCAGAGTACAGTGGTGATTATGGTGATGCTATCACGAAGACAAATCTGAAAGATTTTCATCGGAGAAGAGTTCAAATTTTAGCAGATTCAGGCGCTGACCTGCTTGCATTTGAAACAGTGCCCAATAAGCTTGAAGCTGAGGCTTATGCTGAGCTTATGGAAGAAGAGGACATCAAAATTCCAGCATGGTTTGCTTTTAACTCTAAGGATGGAGTAAATGTTGTTAGCGGTGATTCTCTATTGGAATGTGGCTCTATTTCTGAATCATGCAATAAAGTTGTTGCTGTTGGAATTAACTGTACCCCACCTAGATTTATACATGATCTGATTGTTTTGCTCAAGAAGGTGACAACAAAACCAATTGTAATATATCCAAACAGTGGGGAAACTTATGATGCTGAACTAAAACAGTGGGTGCAAAATACTGGTGTTACAGATGAACATTTTATCTCATATGTTACTAAATGGCGTGAGCTAGGGGCTTCCCTTGTAGGTGGCTGTTGCAGAACGACTCCAGCTACTATAAGGAAGATATACAATGTACTGTCTAGCAGTGAATCTGCTATTGTTGGGAAAGAGTGA 1041 0.438 KQVPLSGVKMSSLLVDLLRQSGGTAVIDGGLATELERHGADLNDPLWSAKCLFSSPHLIRQVHLDYLENGADIIITASYQATIQGFKEKGYTDEESEAMLRRSVEIAREARELYYKRCSECCSGDKAEGKILKQRPILIAASVGSYGAYLADGSEYSGDYGDAITKTNLKDFHRRRVQILADSGADLLAFETVPNKLEAEAYAELMEEEDIKIPAWFAFNSKDGVNVVSGDSLLECGSISESCNKVVAVGINCTPPRFIHDLIVLLKKVTTKPIVIYPNSGETYDAELKQWVQNTGVTDEHFISYVTKWRELGASLVGGCCRTTPATIRKIYNVLSSSESAIVGKE 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g02791 346 Gene3D - 14 333 IPR036589 -
Vimu6g02791 346 SUPERFAMILY Homocysteine S-methyltransferase 18 337 IPR036589 -
Vimu6g02791 346 PANTHER ZGC:172121 18 339 - -
Vimu6g02791 346 ProSiteProfiles Homocysteine-binding domain profile. 13 335 IPR003726 -
Vimu6g02791 346 PIRSF BHMT 2 210 IPR017226 GO:0008168|GO:0008270|GO:0009086
Vimu6g02791 346 PIRSF BHMT 285 344 IPR017226 GO:0008168|GO:0008270|GO:0009086
Vimu6g02791 346 FunFam Homocysteine S-methyltransferase 14 334 - -
Vimu6g02791 346 Pfam Homocysteine S-methyltransferase 26 334 IPR003726 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g02791 Vimu-Chr6 24520334 24525438 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g02791 K00547 - gmx:100790567 587.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g02791 6 24520334 24525438 Vimu6g02791 6 24520334 24525438 ECH