Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g02778 ATGGGTTGGTTTTCAAAGATTTACACTGTTGCGATCTCTTTCGTCGGTTTCATAATCTGTCACGGCTCGGCTCTCTCAATCAGTTTATATGACAAGGAATGCGTATCTGAACAAGTTCTACATGATGGTGACACTGTTTCTGGGAATTTCGTAGTCATTGACTACGATATTTTTTGGAGCTCAGACCATCCAGGAATCGATTTCAGTGTTACATCTCCGACAGGGAGTTTGGTGTACTCTATGAAGGGAACATCAGGGGACAAATTTCAATTCAAAGCCGCAATACATGGAATATATAAGTTTTGCTTTCAAAACCCTGCTTCAACGCCAGAAACAGTGTCTTTCTACATTCACGTTGGTCACATCCCAAATGAACACGACTTAGCCAAAGATGAACATTTGGATCCCATTAATGTGAAGATTGCTGAGTTACGAGAAGCACTGGAGTCTATTATAATAGAGCAGAAGTACTTGAAAGCACGTGATACTAGGCATCGACACACAAATGAAAGCACCAGAAAACGTGTGGTTTTCTACACAATCTTGGAGTATATTTTGTTCGCTGCAACCAGCTTATTACAAGTCATATACATTCGACGTCTCTTCAGCAAATCATTTGCTTACAACCGAGTATAG 636 0.4041 MGWFSKIYTVAISFVGFIICHGSALSISLYDKECVSEQVLHDGDTVSGNFVVIDYDIFWSSDHPGIDFSVTSPTGSLVYSMKGTSGDKFQFKAAIHGIYKFCFQNPASTPETVSFYIHVGHIPNEHDLAKDEHLDPINVKIAELREALESIIIEQKYLKARDTRHRHTNESTRKRVVFYTILEYILFAATSLLQVIYIRRLFSKSFAYNRV 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g02778 211 ProSiteProfiles GOLD domain profile. 32 119 IPR009038 -
Vimu6g02778 211 SUPERFAMILY Supernatant protein factor (SPF), C-terminal domain 37 128 IPR036598 -
Vimu6g02778 211 Pfam emp24/gp25L/p24 family/GOLD 31 202 IPR009038 -
Vimu6g02778 211 PANTHER TRANSMEMBRANE EMP24 DOMAIN-CONTAINING PROTEIN 23 204 IPR015720 -
Vimu6g02778 211 SMART EMP24_GP25L_2 24 203 IPR009038 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g02778 Vimu-Chr6 24370958 24371949 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g02778 K20347 - gmx:100789501 391.349
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g02778 6 24370958 24371949 Vimu6g02778 6 24370958 24371949 ECH