Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g02762 ATGGCTTCATCGATGGCAACCACGTTCGTCCCTTTCCCCCAAACACAGAAGAGCCAAGCCCGCAGCTTTCTATCCCAACCACCAAACACAGTAAAGAAACTCAAACCCAAACACACCAAAGCTTTAAAAGCTTACGCAACCAGCGTAACATGCAGTGCCACGCTTTCATCTACCGTGGAGACCATTGAGGGAGGGAAGAAACAAAAGGAAGTGGCGGAGGTGTGGCGCAAGATCCACGGGGAGGACAACTGGGCCGGCCTTCTGGATCCCTTGGACCCGTTAATGCGGACCGAACTGATCCGCTACGGGGAGATGGCCCAGGCCTGCTACGACGCCTTCGACTACGACCCCTACTCCAAATACTGCGGCAGCTGCATGTTCTCCATACCCGAGTTCTTTCAAAGCCTCGACATGACCAACGTGGGATACAACGTCACACGTTATCTCTACGCCACGGCCAACATCAACCTCCCAAAATTCTTCCGGAAATCGCGGTGGCCGGACAAGAAGTGGAGCCAGCACGCGAACTGGTCGGGCTTCATCGCGGTGTCGGACGACGCGACGAGCAAGCGTCTGGGGCGGAGAGACATCACGATCGCGTGGCGAGGGACGGTGACGAACGTGGAGTGGGTGGCTGACCTGACAAATTTCCTGAGACCGATCGCTCCCCACATCCCGAGTCCCGACGAGGGTATAAAGGTGGAAGCCGGTTTCTTGGATCTTTACACGGACAAAGAACAGGAGTGTGGGTATTGTAAGTACTCGGCGAGGGAACAGGTCCTCGGGGAGGTGAAACGGTTGATGGCGATTTATTCAGATGAAGAGGTGAGTATTACGATAACGGGGCATAGTCTGGGGAGTGCGATGGCGATACTGAGTGGTTTCGATATCGTGGAAAATGGGGCGAGTGTGGGAAAGAGTGGGAGAAAAGCACATGTTTCGGTGTTTTCGTTTTCGGGGCCGAGGGTGGGGAATGCGAAGTTTAAGGAGAGGTTGGAGGGGGAGCTGGGGGTAAAGGTGCTGAGGGTGCATAACAAGCACGACCTTGTGCCGCAGTCGCCGGGTTTCGTGTTCAACGAGGGGTTGCCGCCATGGCTGGTGAAGCTCTTGGATTGGTTGCCATGGTGTTATTTGCACGTTGGGCAGGAGTTGGAATTAGATCATAAGCAATCACCTTTCTTGAACCCCAATGGGGATGCTGCCTGCGCCCATAACTTGGAGGCTCACTTGCACTTGCTCGATGGATACCATAGGAAGTATGATCCATTTAAGAGAACGAGTGAGAGAGACATTGCTTTGGTGAACAAGGCTTGTGACTTCTTGAAGGACGAGTATACGGTGCCACCAAACTGGAGGCAAGATCTGAACAAGAACATGATGAAGACTGAAAGTGGACGGTGGATGTTCACTGATCGTCAAGTGTCTCAAGATCCACACCACCAAGATATTGATCCTCATCTCGAGGAACTCGGTCTCTTCTCTTCTAACAAATCAACCAATTAG 1503 0.5296 MASSMATTFVPFPQTQKSQARSFLSQPPNTVKKLKPKHTKALKAYATSVTCSATLSSTVETIEGGKKQKEVAEVWRKIHGEDNWAGLLDPLDPLMRTELIRYGEMAQACYDAFDYDPYSKYCGSCMFSIPEFFQSLDMTNVGYNVTRYLYATANINLPKFFRKSRWPDKKWSQHANWSGFIAVSDDATSKRLGRRDITIAWRGTVTNVEWVADLTNFLRPIAPHIPSPDEGIKVEAGFLDLYTDKEQECGYCKYSAREQVLGEVKRLMAIYSDEEVSITITGHSLGSAMAILSGFDIVENGASVGKSGRKAHVSVFSFSGPRVGNAKFKERLEGELGVKVLRVHNKHDLVPQSPGFVFNEGLPPWLVKLLDWLPWCYLHVGQELELDHKQSPFLNPNGDAACAHNLEAHLHLLDGYHRKYDPFKRTSERDIALVNKACDFLKDEYTVPPNWRQDLNKNMMKTESGRWMFTDRQVSQDPHHQDIDPHLEELGLFSSNKSTN 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g02762 500 PANTHER PHOSPHOLIPASE A1-IBETA2, CHLOROPLASTIC 23 473 - -
Vimu6g02762 500 SUPERFAMILY alpha/beta-Hydrolases 97 414 IPR029058 -
Vimu6g02762 500 Pfam Lipase (class 3) 199 356 IPR002921 GO:0006629
Vimu6g02762 500 CDD Lipase_3 131 388 - -
Vimu6g02762 500 Gene3D alpha/beta hydrolase 74 482 IPR029058 -
Vimu6g02762 500 FunFam Phospholipase A1-II 3 74 479 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g02762 Vimu-Chr6 24179077 24182418 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu6g02762 66 492 Acyl Lipid Metabolism Gene Families AT2G30550 58.333 0.0 530
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g02762 - - gmx:100815007 770.385