Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g02759 ATGAAGTCATCGCGTTGGTGGCAGAGGACTCTGATCCTCGCTCTTCTCTCTGTCTCCGTCGTTGCTCCGGTCTTCTTGGTCTATCACCGCCTCAATCTCTCTCCCTACGCAAGACGAGAGTTTCAAGAAGATATATCCAGTGTTACATTTAGGACAGATCCTTTACAGCTAAATGCTATTGGACAGGAAGGTGTTGAAGAATTGGAAGAGCCAAAAGAAGTTGTTTATAAAGAAAAAGATTTTGGTTCAACAAATCGTTTCATACAACAAAATATTAATGATTGTGAGAAATCTAAAATCCAAGGGTGTAGAAATAACATTTTGGAAAGAAATGGTTGGTTTTCAGAATTTAACCAGGACACAAGGCAAGACCTGAAAGCTCAGCAGAAAGAATTATTCTCCATCGTTGAGGATGAGAACATATTTAATACAACAGTCACACATAACCGGAGCATGCACACTCATTCTCAAAAAACGGCAGATGCTAATGTTGAAGTGAAAGATAAGAAATCTATGCCAAGAGCAACCCAAAATCATCAGAGTTCACGTCCTCAGCCTCGGAGAGTGTTAAATCAGAAGGTTTTAGAAATTAAGGATCAAATTATTAGAGCCCGAGCATACTTGGGTTTTGCTTCACCAGGCAGCAGCTCACGCTTGATGAAGGAGTTGAAGCTGAGAATTAAAGAGATGGAACGTGCACTTGGAACAGCTACTAAGGATTCAGACCTGTCTAGGAGTGAAGTTCACAGTGCTTTGCAGAAAATGAGACACATGGAGGCTTCACTGTCTAAAGCAGACCATGCTTTCCCAGACTGCACTGCTATGGCAACTAAGCTCCGTGCAATGAACCATAAGACCGAAGGGGAAATTCGTTATCAACAACGTGAAACAACATATCTTGTTCATCTTGCTGCAAGGACTACCCCAAGAGGTGTTCACTGTCTTTCCATGCAGCTAACTGCTGATTACTTTGCCCTGAGACCTGAGGACAGGAAGCTTCCAAATGAAAATAAGATTAATGATCCAAAACTTCATCATTATGTTGTCTTCTCTGACAATGTTCTGGCGTGTGCAGTTGTTGTTAACTCTACTATCTCTAATGCCAAGAAACAGGGGAAACTTGTTTTCCATGTAGTGACCAATTCACTAAACTTTCCTGCAATCTGGATGTGGTTCTTATTAAACCCTCCTGGCAAAGCCACAGTCCACATACAAAGCATAGAGAACTTTGAATGGTTGCTCAAGTACAATACATTCAAAGAACAAAATTCCAGTGATCCAAGGTTTACTTCTGAGTTGAACTACCTGCGTTTCTACCTTCCAGATATCTTCCCTACTTTAAATAAGGTTGTGCTCTTTGATCATGATGTCGTGGTGCAACAAGATCTCAGTAGGCTATGGAATGTTAATATGAAAGGGAAAGTAAATGCAGCAGTTGGCACTTGTCAGGAAGGGGAAACTTCATTTCATAGGATGGATACGTTCATAAACTTCTCGGATCCATTCATTGCAAATAGGTTTGATGTCAATGCTTGCACTTGGGCATTTGGGATGAACTTGTTTGATTTACAACAGTGGAGAAGACAAAATTTAACTGCTCTCTATCACAGTTATTTGCAAATGGGTTCCGAGAGGCCATTGTTGAAAACTGGAAGTCTTCCTTTAGGGTGGCTGACCTTCTATAACAAGACTATGATTTTGGACAAACGGTGGCAGATTCTTGGTCTTGGTTATGACTCAGATGTTGATAAAAACCAGATTGAATGGGCTGCGGTTATACACTTCGATGGAATTAGGAAACCGTGGTTAGACATTGCAATGGGAAGATATAGAAGTTACTGGACCAAATTTGTGGAGTTTGACCACCCTATCTTGCAACGTTGCAATCTCCAGGCGTAG 1899 0.4113 MKSSRWWQRTLILALLSVSVVAPVFLVYHRLNLSPYARREFQEDISSVTFRTDPLQLNAIGQEGVEELEEPKEVVYKEKDFGSTNRFIQQNINDCEKSKIQGCRNNILERNGWFSEFNQDTRQDLKAQQKELFSIVEDENIFNTTVTHNRSMHTHSQKTADANVEVKDKKSMPRATQNHQSSRPQPRRVLNQKVLEIKDQIIRARAYLGFASPGSSSRLMKELKLRIKEMERALGTATKDSDLSRSEVHSALQKMRHMEASLSKADHAFPDCTAMATKLRAMNHKTEGEIRYQQRETTYLVHLAARTTPRGVHCLSMQLTADYFALRPEDRKLPNENKINDPKLHHYVVFSDNVLACAVVVNSTISNAKKQGKLVFHVVTNSLNFPAIWMWFLLNPPGKATVHIQSIENFEWLLKYNTFKEQNSSDPRFTSELNYLRFYLPDIFPTLNKVVLFDHDVVVQQDLSRLWNVNMKGKVNAAVGTCQEGETSFHRMDTFINFSDPFIANRFDVNACTWAFGMNLFDLQQWRRQNLTALYHSYLQMGSERPLLKTGSLPLGWLTFYNKTMILDKRWQILGLGYDSDVDKNQIEWAAVIHFDGIRKPWLDIAMGRYRSYWTKFVEFDHPILQRCNLQA 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g02759 632 MobiDBLite consensus disorder prediction 150 186 - -
Vimu6g02759 632 MobiDBLite consensus disorder prediction 160 174 - -
Vimu6g02759 632 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 335 622 IPR029044 -
Vimu6g02759 632 Coils Coil 220 240 - -
Vimu6g02759 632 PANTHER GALACTURONOSYLTRANSFERASE 4-RELATED 155 630 IPR029993 GO:0047262
Vimu6g02759 632 Pfam Glycosyl transferase family 8 314 606 IPR002495 GO:0016757
Vimu6g02759 632 SUPERFAMILY Nucleotide-diphospho-sugar transferases 346 629 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g02759 Vimu-Chr6 24166725 24171618 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu6g02759 1 632 Glycosyltransferase AT1G06780 48.457 0.0 594
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g02759 K13648 - gmx:100793193 952.199