Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g02746 ATGAGTTCCGTCTGTGATGGTGGCGCCACCGTAATCCCGGGTCTCCCGAACGACGTCGCGGCGTGGATCCTCTCCAAAGTGCCATACTCGCACCACGCGAGACTGAAAAGCACTTGCAAATCATGGAAACTGCTTTTGTCTTCGAGATCGTTCCTAAACTCTTTGAATAAGAGGAACCGTCTTCTCTGCATCTTCCCGCAGGACCCATCGATCGCGTCGCCGTTCCTCTTCGACCCAAACGCGCTCGCCTGGTGCCCTCTCCCTCCCATGCCCTGCAACCCCCACGTGTACGGCCTCTGCAACTTCGCCGCGGTGCCTCTTGGGCCCCACCTTTACGTCCTCGGGGGCTCCCTCTTCGACACTCGCTCCTTCCCAATCGATCGCCCCTCGCCCTCCTCGGCCACCTTCCGCTTCAACTTCCACGACTTCTCCTGGGAGCCACGCGCCCCCATGCTCACGCCTCGGGGAAGTTTCGCCTGCGCCGTCGTCCAGGGGCGTATTCTTGTCGCCGGCGGGGGGTCGCGGCATACGATGTTTGGGGCTGCTGGGACTAGGATTCGGTCGGTTGAGCGGTACGAGGTGGGGAGGGACCGGTGGGTGGCGATGGATCCACTGCCCGGGTTTCGGGCCGGGTGTGTGGGGTTTGTTGGCGGGGAGGGGAGGGAGTTCTGGGTGGTGGGAGGGTACGGCGCGTCGCGGACCATATCCGGGGTTTTTCCGGTGGATGAGTATTACAGGGATGCAGTGGTGATGACTGTTGAGGGTGGAGCGTGGCGGGAGGTTGGGGATGTGTGGGGGGATGGGGAGAGAGTGAGGGTTGGGAAGATTGTGGTGGTGGATGATGATGGATGTCCCACGCTTTTCATGCTTGATGGGAACGAGATTTTGAGGCAATGTACTGTTATTGAGACAAGTGATGATACAACTTTGATTCAGACTTTTTGGGATGTGGGACTTCTACTAGATTTGACCCTATGTCATTTCTTGTTGCCATTTTGA 999 0.5866 MSSVCDGGATVIPGLPNDVAAWILSKVPYSHHARLKSTCKSWKLLLSSRSFLNSLNKRNRLLCIFPQDPSIASPFLFDPNALAWCPLPPMPCNPHVYGLCNFAAVPLGPHLYVLGGSLFDTRSFPIDRPSPSSATFRFNFHDFSWEPRAPMLTPRGSFACAVVQGRILVAGGGSRHTMFGAAGTRIRSVERYEVGRDRWVAMDPLPGFRAGCVGFVGGEGREFWVVGGYGASRTISGVFPVDEYYRDAVVMTVEGGAWREVGDVWGDGERVRVGKIVVVDDDGCPTLFMLDGNEILRQCTVIETSDDTTLIQTFWDVGLLLDLTLCHFLLPF 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g02746 332 PANTHER F-BOX/KELCH-REPEAT PROTEIN OR23 9 301 - -
Vimu6g02746 332 Pfam Kelch motif 154 206 IPR006652 GO:0005515
Vimu6g02746 332 SMART kelc_smart 110 165 IPR006652 GO:0005515
Vimu6g02746 332 SMART kelc_smart 166 218 IPR006652 GO:0005515
Vimu6g02746 332 SUPERFAMILY Kelch motif 66 282 IPR015915 GO:0005515
Vimu6g02746 332 Gene3D - 67 314 IPR015915 GO:0005515
Vimu6g02746 332 CDD F-box_AtAFR-like 12 51 - -
Vimu6g02746 332 SUPERFAMILY F-box domain 10 68 IPR036047 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g02746 Vimu-Chr6 24000292 24007845 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g02746 - - gmx:100820159 534.258
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g02746 6 24000292 24007845 Vimu6g02746 6 24000292 24007845 ECH