Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g02716 ATGGGAGAATGTCGTACTACAAAAGGAGAGGAGGAAGAAGATTGTGCGCGTAACTACGACAGAGGGAAACAAAGAGGAGGAAGAAGATTGTGCGCGTATCTGCGACAGAGAGAAACGGAGAGGAGGAAGAAGATTCTGCGCGTAACTGCGACAGAGAGAAACAAAGAGGAGGAAGAAGACGATGCGTGTAACTGCGACGCTGAACGAAGTGACGTTTCAGTATCCGGTCAGTCGAGTAGACGACGGGGACCTGGGGGAGCCGACGTCTATAATCTTATAGACGTCGGCATGGGTGTTGCTGATCACAGAAAAACTACTTTCATGGAACTGAAGCAGAAGAAGGTCCATCGCTATGTGATCTTTAAGGTTGATGAGAAGAAAAGGGAGGTTGTGGTTGAGAAGAGCGGTGGCCCCGCTAAGAGCTATGATGATTTCGCTGCATCTTTGCCTGAGAATGATTGCAGATGGCAATATTACACTAATTAA 486 0.4774 MGECRTTKGEEEEDCARNYDRGKQRGGRRLCAYLRQRETERRKKILRVTATERNKEEEEDDACNCDAERSDVSVSGQSSRRRGPGGADVYNLIDVGMGVADHRKTTFMELKQKKVHRYVIFKVDEKKREVVVEKSGGPAKSYDDFAASLPENDCRWQYYTN 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g02716 161 Pfam Cofilin/tropomyosin-type actin-binding protein 104 159 IPR002108 GO:0003779
Vimu6g02716 161 Gene3D Severin 95 160 IPR029006 -
Vimu6g02716 161 SUPERFAMILY Actin depolymerizing proteins 94 159 - -
Vimu6g02716 161 PANTHER COFILIN-RELATED 96 159 IPR017904 GO:0015629|GO:0030042
Vimu6g02716 161 MobiDBLite consensus disorder prediction 49 87 - -
Vimu6g02716 161 MobiDBLite consensus disorder prediction 1 25 - -
Vimu6g02716 161 ProSiteProfiles ADF-H domain profile. 94 161 IPR002108 GO:0003779
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g02716 Vimu-Chr6 23724436 23727012 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g02716 K05765 - gmx:100819975 108.227
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g02716 6 23724436 23727012 Vimu6g02716 6 23724436 23727012 ECH