Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g02709 ATGGCGGGAGGAAATTCACCATCTATTCCGTATGCCTCAGAGTCATATGCACATCAATATCCTGTAGATCCCCCTGAAAGATACCCAATTCCTGATGCTGAACTAGATATGGATGATCCGGCGGCTTTCTCTTCTAATTACCAACAAATATCAGTGGAGGAGACGAAAGAGCATCTAGTGGTTGCTCGGAATAGTCTCGAGTTGCTTTCTAGCATATTGAGTTCTGAGGCTGACCCAAAACCTTTGAAGGAAGATTTAACTGTGAGCTTGTTGGGCAAGTGCAAGCAATCACTCTCTATCATCAAGGGGATTGTGGAAAGCACTACAGATGATGAAGCAACGCTTTTTGAGGCTTTATATCTCAATGATGAGCTTCAGCAGGTAATTTCTAACTATGAGAAGTTAGAAGCTGCTCAAATGTCTGGGACACCACAACCTCAAAATGCTGAACCCGCCAAGCATGACGCGGAAGCTGTTCAAAATCCCAATGAAGTACCTGCAAGGTTTGAAATTGATGATTCGGAAGAATCTGAAGCTGATCAGAATCTGGATCGAAAGTTGCCCGAAAAATCGAACACTCTTGAAGTCAATGCAACTGAGGTCGAGGGGAATGATCTTACTGAAACTAAAATAGTTAAGGACACAACGGAAAAGAATGGTGAATCTAGCTTCAAGCGAGATACCGAATGA 690 0.4304 MAGGNSPSIPYASESYAHQYPVDPPERYPIPDAELDMDDPAAFSSNYQQISVEETKEHLVVARNSLELLSSILSSEADPKPLKEDLTVSLLGKCKQSLSIIKGIVESTTDDEATLFEALYLNDELQQVISNYEKLEAAQMSGTPQPQNAEPAKHDAEAVQNPNEVPARFEIDDSEESEADQNLDRKLPEKSNTLEVNATEVEGNDLTETKIVKDTTEKNGESSFKRDTE 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g02709 229 MobiDBLite consensus disorder prediction 137 229 - -
Vimu6g02709 229 ProSiteProfiles GAT domain profile. 50 137 IPR004152 GO:0035091|GO:0043130
Vimu6g02709 229 Pfam GAT domain 63 136 IPR004152 GO:0035091|GO:0043130
Vimu6g02709 229 Gene3D - 44 139 IPR038425 -
Vimu6g02709 229 MobiDBLite consensus disorder prediction 1 38 - -
Vimu6g02709 229 MobiDBLite consensus disorder prediction 206 229 - -
Vimu6g02709 229 PANTHER TOM1-LIKE PROTEIN 1 20 216 IPR044836 GO:0035091|GO:0043130|GO:0043328
Vimu6g02709 229 SUPERFAMILY GAT-like domain 14 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g02709 Vimu-Chr6 23683254 23687142 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g02709 - - gmx:100803803 340.887
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g02709 6 23683254 23687142 Vimu6g02709 6 23683254 23687142 ECH