Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g02707 AAAGCAATAGTCCTTCGTCACAAGATCGTCGCGATGGGTTCTCTTCCTTTGCCGGCATTCCCAGCCGCGGCGGCGAAACATAGCCTTGACGAGAGCAGCCACATTGACGAGAGCGCCCTCACGACGCTGTTCAAGTCCCAGCAGAGCCACCTCAACTTCTTCTTCGAACACATAGACCACTCCCAAACCCTAGCCTTCACGCGCGCTCTCCTTAACGCCGCAGGCACCGTCTTCTTCACTGGCGTCGGCAAGTCCGGCTTCGTCGCCCACAAGATCTCGCAGACGCTCGTCTCGCTCGGCATCCGCTCCGCCTTTCTGTCGCCGGTCGACGCACTCCACGGTGACATCGGGATCCTCACCGACCGTGACGTTCTCGTACTCCTCAGCAAGTCAGGCGCCACCGAGGAGCTCCTCCGCCTGGTGCCTTGCGCGAGGGCGAAGGGCGCACTCCTCATCGCGCTCACCTCCGTCGAAGGTAACGCGCTGGCTGCGGCGTGCGACATGGCCGTGCATTTGCCTCTCCAGAGAGAGCTCTGTCCGTTCAACCTTGCGCCGGTCACATCCACCGCCATTCAGATGGTTTTCGGGGACACTGTGGCCATCGCGCTCATGGAGGCGAGGAATCTCACGAAGGAGGAGTACGCTGCGAACCATCCCGCTGGCAAGATCGGGAAGAGTCTCATCTTCAAGGTAAAGGATGTGATGAGGAAACAGGACGACCTTCCGATTTGCAGAGAAACGGATTTGATTATGGATCAGCTTGTGGAACTGACGAGCAAAGGATGCGGATGCCTCCTTGTGATCGATGACCGGTACCGTCTGATCGGAACGTTCACCGACGGTGATCTTCGTCGCACTCTCCGAGCCAGCGGGGAAGCCATTTTCCAACTCACTGTGGGGAGGATGTGCAACAGGAATCCAAGAACTATTGGCCCGGAGGCTATGGCGGTGGAGGCGATGAAGAAAATGGAAGCACCTCCGTCGCCTGTTCAGTTTTTGCCTGTGATAAACGATGAGAATATTTTAATTGGGATTGTGACCTTGCATGGATTGGTTTCTGCTGGGTTGTGA 1071 0.5724 KAIVLRHKIVAMGSLPLPAFPAAAAKHSLDESSHIDESALTTLFKSQQSHLNFFFEHIDHSQTLAFTRALLNAAGTVFFTGVGKSGFVAHKISQTLVSLGIRSAFLSPVDALHGDIGILTDRDVLVLLSKSGATEELLRLVPCARAKGALLIALTSVEGNALAAACDMAVHLPLQRELCPFNLAPVTSTAIQMVFGDTVAIALMEARNLTKEEYAANHPAGKIGKSLIFKVKDVMRKQDDLPICRETDLIMDQLVELTSKGCGCLLVIDDRYRLIGTFTDGDLRRTLRASGEAIFQLTVGRMCNRNPRTIGPEAMAVEAMKKMEAPPSPVQFLPVINDENILIGIVTLHGLVSAGL 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g02707 356 ProSiteProfiles CBS domain profile. 235 294 IPR000644 -
Vimu6g02707 356 CDD SIS_Kpsf 75 202 IPR035474 -
Vimu6g02707 356 SUPERFAMILY SIS domain 49 355 IPR046348 GO:0097367|GO:1901135
Vimu6g02707 356 ProSiteProfiles SIS domain profile. 66 209 IPR001347 GO:0097367|GO:1901135
Vimu6g02707 356 ProSiteProfiles CBS domain profile. 303 356 IPR000644 -
Vimu6g02707 356 Pfam CBS domain 299 354 IPR000644 -
Vimu6g02707 356 Pfam CBS domain 231 287 IPR000644 -
Vimu6g02707 356 NCBIfam KpsF/GutQ family sugar-phosphate isomerase 75 346 IPR004800 GO:0005975|GO:0016853
Vimu6g02707 356 PIRSF KdsD_KpsF 24 356 IPR004800 GO:0005975|GO:0016853
Vimu6g02707 356 PANTHER - 26 356 - -
Vimu6g02707 356 CDD CBS_pair_SIS_assoc 227 352 - -
Vimu6g02707 356 Gene3D - 226 354 IPR046342 -
Vimu6g02707 356 Pfam SIS domain 71 201 IPR001347 GO:0097367|GO:1901135
Vimu6g02707 356 Gene3D - 35 225 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g02707 K06041 - gmx:100805755 612.453
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g02707 6 23616838 23618206 Vimu6g02707 6 23616838 23618206 ECH