Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g02698 CCCTTGTTTCTTTTTCCTGCAGAGGCCCTTCGTGAGAGTAAACGAGAAATGGCAAACGCCACTAGAGGTGTGGAGAAGGAAATTGGAGCACTACAATTGGAAGAAAAGAAGCTTCTTGCTGAGATAAAAAGAACTGCTAAGACAGGCAATGAGGCAGCTACTAAAATTCTAGCACGCCAGTTGGTCAGGCTTAGGCAACAAATTGCCAATCTTCAAGGTAGTAGAGCTCAGATGAGAGGCATAGCAACTCACACGCAGGCGATGCATGCCCATTCTTCTGTTGCTGCTGGCATGAAAGGCGCTACAAAGGCAATGGCAGCTATCAATAAGCAAATGGAGCCAGCTAAGCAAGCTAAAATTATACAGGACTTCCAGAAACAATCAGCACAGATGGATATGACTACTGAAATGATGTCAGATGCCATAGATGATGCCTTGGATGATGATGAAGCTGAAGAGGAAACCGATGAACTGACAAATCAGGTGCTGGATGAAATTGGTGTGGATGTTGCCTCACAGTTATCAGCAGCCCCCAAAGGGAGAATTAGAACAAAGAATACTGAAGATGTTAGCAGCTCGGGCATTGACGAACTTGAGAAGCGTTTGGCAGCTCTTAGAAACCCTTAA 627 0.4514 PLFLFPAEALRESKREMANATRGVEKEIGALQLEEKKLLAEIKRTAKTGNEAATKILARQLVRLRQQIANLQGSRAQMRGIATHTQAMHAHSSVAAGMKGATKAMAAINKQMEPAKQAKIIQDFQKQSAQMDMTTEMMSDAIDDALDDDEAEEETDELTNQVLDEIGVDVASQLSAAPKGRIRTKNTEDVSSSGIDELEKRLAALRNP 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g02698 208 Gene3D - 5 177 - -
Vimu6g02698 208 Pfam Snf7 12 181 IPR005024 GO:0007034
Vimu6g02698 208 MobiDBLite consensus disorder prediction 175 194 - -
Vimu6g02698 208 PANTHER CHARGED MULTIVESICULAR BODY PROTEIN 6 207 IPR005024 GO:0007034
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g02698 Vimu-Chr6 23522020 23524837 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g02698 K12192 - gmx:100306343 327.791
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g02698 6 23522020 23524837 Vimu6g02698 6 23522020 23524837 ECH