Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g02697 ATGTCCAACAACAACAACAAGGTGAAGGGTCTCCTGAAAGGTTTAAGATTCATTTCTCAGATGTTCGATGAGAAAGATTCAGACATTCAGATTGGTCATCCCACAGATGTAAAGCATCTAGCACATATTGGATGGGATGGCCAAGGTCTCTCTGACAATAACCCCACCTGGATGAACGAGTTTAAATCTGTCCCAGGGAATTCATCTGCATCTCACAGTCGTAAAGGAGACATTGATCACAGCAAAGAATCGAATAGTTCAATCAAAAGGGCCTCTGAAGGTGAAGAGTTTTCTTTTGCAGATTCAATGGAAAGAAGTTCAAGATCTGTGAAAGGTGATGAGAGGCATTCGTTCGAGTCGGCAAAATGTAAACAACATTCAAATTCAACGGGGAATGTAAGAGAGTCTCAGGCAAAGGAAAAATCTGACAGACCAAGGCGTTCAAAAAAGTCATCAAAATCATCGCAGCAATCGCATGATTCATGTCAAGCATCGAAAGACACCGACCACGACATGCACACGGGTGATAATTCCCACCAACAAGAAGACAGTGATTTGGCGGCGCCTAGAAAGTCACGTCCCAAGATGTCAAAAGATGGTTCCAATGTTGGTGGTGCCTCAAGCAAAGGAAGATCAAAATGCGAAGGCCATGGGAGACGTAGCTCCAAATTAGCTAACAAACATGAGTCTTTACAAGGAGATGGACACGTTGAGACAACAAAGTCTACAGAAGATACAGGAAAAAGTAACCTAAATGGACAGTGA 765 0.4288 MSNNNNKVKGLLKGLRFISQMFDEKDSDIQIGHPTDVKHLAHIGWDGQGLSDNNPTWMNEFKSVPGNSSASHSRKGDIDHSKESNSSIKRASEGEEFSFADSMERSSRSVKGDERHSFESAKCKQHSNSTGNVRESQAKEKSDRPRRSKKSSKSSQQSHDSCQASKDTDHDMHTGDNSHQQEDSDLAAPRKSRPKMSKDGSNVGGASSKGRSKCEGHGRRSSKLANKHESLQGDGHVETTKSTEDTGKSNLNGQ 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g02697 254 ProSiteProfiles CRIB domain profile. 31 44 IPR000095 -
Vimu6g02697 254 MobiDBLite consensus disorder prediction 212 243 - -
Vimu6g02697 254 MobiDBLite consensus disorder prediction 60 254 - -
Vimu6g02697 254 SMART PBD_5 31 64 IPR000095 -
Vimu6g02697 254 CDD CRIB 29 63 - -
Vimu6g02697 254 MobiDBLite consensus disorder prediction 163 197 - -
Vimu6g02697 254 Gene3D CRIB domain 25 75 IPR036936 -
Vimu6g02697 254 MobiDBLite consensus disorder prediction 136 154 - -
Vimu6g02697 254 MobiDBLite consensus disorder prediction 73 122 - -
Vimu6g02697 254 PANTHER CRIB DOMAIN-CONTAINING PROTEIN RIC8 6 217 IPR044510 -
Vimu6g02697 254 Pfam P21-Rho-binding domain 30 64 IPR000095 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g02697 Vimu-Chr6 23518272 23519520 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g02697 - - gmx:102666244 182.185