Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g02695 ATGTGCATGGCGAGCCCAGGTTTATACCGCAGAGAGCTACCTTCCCCTGCAATTGAGTTTGCTTCGCCACTAGGCAAGAAGCTGTTCGGCGAGGCACATGAGCAAGGAACCATGGAAGGCTTCTTCAAGCTAATATCCTACTATCAGACGCAATCAGAGCCTGCATACTGCGGTCTCGCCACACTTTCCGTTGTTCTCAATGCCCTTGCTATTGATCCTGGAAGAAAATGGAAAGGTCCTTGGAGATGGTTTGACGAGTCCATGCTGGATTGCTGTGAGCCTTTGGCTCAAATTAAACTGGAAGGCATTACGTTCGGGAAAGTTGCGTGTTTGGCTCGATGCAATGGAGCTAAGGTGGAAGCCTTTCGATCGGATAAAAGCTCGGTTGATGAGTTTCGCAAACTTGTGATTTCGTGCTCTCAGTCTGAGGATTCTCATGTGATTGTATCTTACCACAGGACACCCCTCAATCAGACTGGAATTGGTCATTTTTCACCACTTGGAGGATATCACGCTGAAATGGATATGGTCCTCGTATTGGATGTTGCTCGTTTCAAGTATCCTCCTCACTGGGTTCCCCTTACCCTTCTCTGGGAGGGAATGAGCACCATTGATCAAGCAACGGGACTTCGAAGGGGGTACATGGTTATTTCAAGGCTTAACAGAGCACCCTCTATACTTTATACTGTGAGTTGTAGACATGAAGGTTGGAGCCGTGTCGCCAAATTTCTAACTGAAGACGTCCCTCAACTTCTAAAGTCAGAGGATCTAAAAGATGTTCAGGAAGTGCTGTCTGTTGTTTTTAAACCCCCTCCTAGTGAATTGAGAGGGTTAATAACATGGATTGCTGAAGTTCGCAGACAAGAAGATGGAAATCTCACATTGAGCGACGAGGAAAAAGGAAGGCTTGCTTTAAAGGCTGACATACTGGAACAGATTCGAACAACTGCAGTCTTCAAACACGTGACCAGATGGTTGGATTCTGAAAATTCAAGTTCTAAAACATATGCAAACCTTGGTGAGGAAGATACGCTAGCAGTACTTGCCACCTGTGTTTGTTGCCAAGGGGCAGATCTTTTGACTGGTTGTGGTAGGTTAGGTTTGTCAAGTGGAAAAAACTGCTGTCAAATAGAGGTAAAACTTGTGAATGTTGACAGTGAGAATCCAGGAACATTAGTTTCAGGAACTGTTACAACTAGTGGTGGTAGTGAAGAAGTTGAAGTGTTGGTCCCTCTGTGTCAAAGGGAGCCAAGCAGGTTATGTCTTTATAATGAAGGTCACTGCATAGAGATGCACCCGTGTGATGCAGATTTCTTAACTGTACTTTTATTGGCCTTGCCCTTCCATACATGGTCGGGTTTTAAAGAAGAAAAGCTGCGAGTGGATGTTTTGAGCCTTCTAGCAACTGAAGACCTCCCTCCCCTACTTCAGGAAGAGGTAATGTTCGGAAAGCATGAATTGATACCATGGGTTTTGTTATTGCGAGACCAATTTCATTTTCTCATGCAACGTTGTGGTGACGTGTAG 1527 0.4519 MCMASPGLYRRELPSPAIEFASPLGKKLFGEAHEQGTMEGFFKLISYYQTQSEPAYCGLATLSVVLNALAIDPGRKWKGPWRWFDESMLDCCEPLAQIKLEGITFGKVACLARCNGAKVEAFRSDKSSVDEFRKLVISCSQSEDSHVIVSYHRTPLNQTGIGHFSPLGGYHAEMDMVLVLDVARFKYPPHWVPLTLLWEGMSTIDQATGLRRGYMVISRLNRAPSILYTVSCRHEGWSRVAKFLTEDVPQLLKSEDLKDVQEVLSVVFKPPPSELRGLITWIAEVRRQEDGNLTLSDEEKGRLALKADILEQIRTTAVFKHVTRWLDSENSSSKTYANLGEEDTLAVLATCVCCQGADLLTGCGRLGLSSGKNCCQIEVKLVNVDSENPGTLVSGTVTTSGGSEEVEVLVPLCQREPSRLCLYNEGHCIEMHPCDADFLTVLLLALPFHTWSGFKEEKLRVDVLSLLATEDLPPLLQEEVMFGKHELIPWVLLLRDQFHFLMQRCGDV 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g02695 508 Gene3D - 17 222 IPR038156 -
Vimu6g02695 508 ProSiteProfiles Phytochelatin synthase (PCS) domain profile. 3 222 IPR007719 GO:0010038|GO:0016756|GO:0046872|GO:0046938
Vimu6g02695 508 SUPERFAMILY Cysteine proteinases 13 218 IPR038765 -
Vimu6g02695 508 Pfam Phytochelatin synthase 9 214 IPR007719 GO:0010038|GO:0016756|GO:0046872|GO:0046938
Vimu6g02695 508 Pfam Domain of unknown function (DUF1984) 232 485 IPR015407 GO:0010038|GO:0016756|GO:0046872|GO:0046938
Vimu6g02695 508 FunFam Glutathione gamma-glutamylcysteinyltransferase 1 16 221 - -
Vimu6g02695 508 PANTHER GLUTATHIONE GAMMA-GLUTAMYLCYSTEINYLTRANSFERASE 6 482 IPR040409 GO:0016756|GO:0046872|GO:0046938
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g02695 Vimu-Chr6 23500568 23504040 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g02695 K05941 K17756 gmx:100782042 844.343
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g02695 6 23500568 23504040 Vimu6g02695 6 23500568 23504040 ECH