Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g02693 ATGGAAGGTAGTGTGAATTGTCACCCATTGCTGAGAGGAGGTAGAACAGAGAAAGGTTACAGCCATGGATTATCCTCTTCTCAGATGCATGTCATATCTTCTATATGTCACGCCCTCTTTCCTTCTTTGCCATTCGAGGGAACTTCTCATGTCCCTTTTCCTCATGAGGCTGCAGAGCTTTTGCGCAAGAGGGTTGTGCCAGAAGCATTGTCCCTCGTGAGTTGGGTTCTTTGGATACTGTCCTTCAGATTGGGGACACTGTTTCTCTGTGGAAGACTTTGCTTCAACTGGAACTGGCCTTTCATCCACAACTTCTCTGAGATCTCCTTGGATAAGAGAGAAGAGATTCTCAGGAACTGGTCCAGGGAGAAGCGTTGGGTGCCCCTCCGGATTGTCTTTTTGCTCATCAAACTTGCTTTCTTCTACACTTTCTTCTCAAGGGCTGATGAAAATGGACTTAATCCCGCATGGGAAGCAATTGGATACCAGGTGGACACCAAGGAAAAGTTGGTACAGAAGGAGAGGCCTCTGCAGAGGGGATTAATAGAGACTATGTATGAAACTGATCATACTTTGATGCAATCCCTCTCTGAAAAAGGCCTTGAAGTTACTGAAGATAAACTGCAGAACCTATACAAGGTCAAATGTGATGTTGTCATTGTAGGATCTGGTTGTGGTGGTGGAGTTGCAGCTGCAGTTCTTGCAAACTCTGGTCAGAAAGTAATCGTCCTAGAGAAAGGAGAGTACTTTGTTTCCCATGATTATTCTTCCCTGGAAGGACCATCCATGAACGAGCTATACGAATCAGGTGGCATTCTGCCTAGTCTTGATGGGAAGATGATGATCCTATCTGGCTCAACTGTGGGTGGAGGCTCTGCTGTAAACTGGTCTGCATGCATCAGAACGCCCGATTCTGTTCTGAGGGAATGGTCGAAAAAAAATAAAATTCCACTTTTTGCAAGCTCTGATTATCAATCTGCCATGGACACGGTATGCAGAAGGATCGGTGTGACAGAGAAGTGCAAGAAACAAGGGTTTCAGAATCAAATTCTCATACAAGGATGTGAGAAAATGGGCTTGAAAGTAGAGTCAGTGGCTTCAAATTCCTCAGAAGATCATTATTGTGGTTCATGCTGTTATGGTTGTAGAACAGGAGATAAGAAGGGTACTGACTCTACTTGGTTGGTTGACGCTGTAGGAAATGGTGCAGTGATCCTCTCAGGATGTAAAGCTGAGAGATTCATACTTGAAGATGGGAATGGTGGAATGAAGAAAAAGAAATGTTCAGGAATTATTGCAGCAGCAACGTGGAGGAGTAAGGTAACAAAGAAACTCCTAATCGAATCCAAGGTAACTATTTCAGCATGTGGCAGTCTGTCCACTCCTCCTCTAATGATTTCCAGTGGACTGAAAAATCCAAACATTGGAAGGAATCTCCATCTTCACCCAGTTCAATTTGCATGGGGATACTTCCCAGAAGACATGACAAACTTCAGTGGCAATAACTACGAGGGTGGGATCATAACTTCGATCCACAAGGTATTTGCAGAAGATTCCACCCCAAGATTCATCATAGAAACACCTGCGTTAGGACCAGGATCATTTTCAGCATTGGCTCCCTGGCTTTCAGGGCATGACATGAAAGACAGGATGGAAAAGTATGCAAGAACTGCTAACATTTTTGCCTTGATTAGAGACCATGGTTCAGGAGAAGTGAAGGCTGAAGGGAGAATAACTTACAGACTTGACCAAGAGGACAAAGAAAACCTTAGAATTGGACTAAGGAAGGCCTTAAGAATTTTGGTTGCAGCAGGTGCTGTGGAAGTTGGCACATTCAGGAGTGATGGGCAAAGACTGAAATGTAAGGGGATGAAGGAGGAAGATTTAGAGGAGTTTCTTGACACTGTGACAATAGTTGGGGGTCCAAGGTCCAGGAATGAACTCTGGACAGTGTTTACATCTGCACATCAGATGACAAGTTGTAGAATGGGTGCCACTGAAGAAGAAGGTGCAGTTGATGAAAATGGTGAGAGTTGGGAAGCAAAAGGCTTGTATGTGTGTGATGGAAGTGTTTTGCCCACTGCAGTTGGTGTCAATCCCATGGTAACCATTCAGTCTACAGCATACTGCATTGCCACCAAGATTGCAGAATCACTTACCAAAGCCAAACATACCATAAATACTTAA 2187 0.4422 MEGSVNCHPLLRGGRTEKGYSHGLSSSQMHVISSICHALFPSLPFEGTSHVPFPHEAAELLRKRVVPEALSLVSWVLWILSFRLGTLFLCGRLCFNWNWPFIHNFSEISLDKREEILRNWSREKRWVPLRIVFLLIKLAFFYTFFSRADENGLNPAWEAIGYQVDTKEKLVQKERPLQRGLIETMYETDHTLMQSLSEKGLEVTEDKLQNLYKVKCDVVIVGSGCGGGVAAAVLANSGQKVIVLEKGEYFVSHDYSSLEGPSMNELYESGGILPSLDGKMMILSGSTVGGGSAVNWSACIRTPDSVLREWSKKNKIPLFASSDYQSAMDTVCRRIGVTEKCKKQGFQNQILIQGCEKMGLKVESVASNSSEDHYCGSCCYGCRTGDKKGTDSTWLVDAVGNGAVILSGCKAERFILEDGNGGMKKKKCSGIIAAATWRSKVTKKLLIESKVTISACGSLSTPPLMISSGLKNPNIGRNLHLHPVQFAWGYFPEDMTNFSGNNYEGGIITSIHKVFAEDSTPRFIIETPALGPGSFSALAPWLSGHDMKDRMEKYARTANIFALIRDHGSGEVKAEGRITYRLDQEDKENLRIGLRKALRILVAAGAVEVGTFRSDGQRLKCKGMKEEDLEEFLDTVTIVGGPRSRNELWTVFTSAHQMTSCRMGATEEEGAVDENGESWEAKGLYVCDGSVLPTAVGVNPMVTIQSTAYCIATKIAESLTKAKHTINT 728
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g02693 728 Gene3D - 568 719 IPR036188 -
Vimu6g02693 728 PANTHER LONG-CHAIN-ALCOHOL OXIDASE 20 723 - -
Vimu6g02693 728 Gene3D - 201 511 IPR036188 -
Vimu6g02693 728 Pfam GMC oxidoreductase 217 484 IPR000172 GO:0016614|GO:0050660
Vimu6g02693 728 SUPERFAMILY FAD/NAD(P)-binding domain 215 720 IPR036188 -
Vimu6g02693 728 PIRSF Lg_Ch_AO 10 725 IPR012400 GO:0046577
Vimu6g02693 728 Pfam GMC oxidoreductase 577 710 IPR007867 GO:0016614
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g02693 Vimu-Chr6 23488520 23491926 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu6g02693 8 719 Acyl Lipid Metabolism Gene Families AT4G28570 58.117 0.0 855
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g02693 K17756 - gmx:100808951 1235.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g02693 6 23488520 23491926 Vimu6g02693 6 23488520 23491926 ECH