Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g02690 ATGGAAAGTGTGAATGGGAAGAGAGAACAGGAAGAAGCAGGGCCTTCGGATGGAACCAAACAAAAAATGACTGAGAAAGTGAGTGATGCTTTGGATGATGGTAAAGCGGAGGAGGAAGAAGTGGACGAGGATGAAGAAGGAGGCATTGGAGTTAGTAAAAATGGTTTCTTTGTTCCTGGGCCTCTTGTTTCTCTCAAGGAGCAGATCGAACGGGACAAGGAGGATGAAAGCCTAAGGAGGTGGAAGGAGAAGCTGTTGGGTTGCTTGGAAAGTTTAGAGGGTCAATTGGATCCTGAAGTGAAATTCCACTCCATAGGAATTATTTCTGAGGATTTTGCTGAAATTGTTACTCCTTTACCTGTGGACGAAAATCGGAATGGTTGTACTCTATTCACTCTCCGAGAGGGATCTCGCTATCAGCTTAAGCTAAAATTTAGTGTTCTGCACAACATTGTGTCTGGCTTGACATACTCCAATACTGTGTGGAAAGGAGGGCTTCAAGTTGATCAGAGCAAAGGAATGTTGGGTACTTTTGCTCCTCAAAAGGAGCCATATGTGTATACCTTGAAGGAGGACACCACTCCCTCTGGTGCACTTGCAAGGGGTGTTTACTCAGCCAAACTAAAGTTTGAAGACGATGATAGAAGGTGTCACATGGAACTCAAATATTTGTTTGAGATAAAAAAGAGCAGCTAG 696 0.4382 MESVNGKREQEEAGPSDGTKQKMTEKVSDALDDGKAEEEEVDEDEEGGIGVSKNGFFVPGPLVSLKEQIERDKEDESLRRWKEKLLGCLESLEGQLDPEVKFHSIGIISEDFAEIVTPLPVDENRNGCTLFTLREGSRYQLKLKFSVLHNIVSGLTYSNTVWKGGLQVDQSKGMLGTFAPQKEPYVYTLKEDTTPSGALARGVYSAKLKFEDDDRRCHMELKYLFEIKKSS 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g02690 231 SUPERFAMILY E set domains 54 230 IPR014756 -
Vimu6g02690 231 Pfam RHO protein GDP dissociation inhibitor 55 229 IPR000406 GO:0005094|GO:0005515|GO:0005737|GO:0007266
Vimu6g02690 231 MobiDBLite consensus disorder prediction 1 33 - -
Vimu6g02690 231 MobiDBLite consensus disorder prediction 1 54 - -
Vimu6g02690 231 Gene3D Coagulation Factor XIII, subunit A, domain 1 55 231 IPR024792 -
Vimu6g02690 231 FunFam Rho GDP-dissociation inhibitor 1 55 231 - -
Vimu6g02690 231 PRINTS RHO protein GDP dissociation inhibitor signature 168 183 IPR000406 GO:0005094|GO:0005515|GO:0005737|GO:0007266
Vimu6g02690 231 PRINTS RHO protein GDP dissociation inhibitor signature 210 227 IPR000406 GO:0005094|GO:0005515|GO:0005737|GO:0007266
Vimu6g02690 231 PRINTS RHO protein GDP dissociation inhibitor signature 151 167 IPR000406 GO:0005094|GO:0005515|GO:0005737|GO:0007266
Vimu6g02690 231 PANTHER RHO GDP-DISSOCIATION INHIBITOR 35 230 IPR000406 GO:0005094|GO:0005515|GO:0005737|GO:0007266
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g02690 Vimu-Chr6 23460655 23462884 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g02690 K12462 - gmx:100810029 387.497
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g02690 6 23460655 23462884 Vimu6g02690 6 23460655 23462884 ECH