Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g02678 ATGGCCAAGTGTCTGGCACTCTCTCTGATCATATTAGGCCTCTTCATTGGGTTGTTGAGTCCACAATGGAACATACTGAACCTAGGATGGGGAAAAAGGGTTGAGGAAGTGAATCCAGAATGGAACATACTGAACCGAATATTGAGAGAGAAAGTGGTTGGAGACAACTTGAAGAGCTACTGTGAGAGTTGGAGGATCAATGTTGAACTAAACAACATTAGAGGGTTCAGTGTTGTGCCTCAAGAATGTGTGGAGCACGTGAAGAAGTACATGACTTCATCTCAGTACAAAGCTGACTCTACGAGGGCAGTGGAGGAGATTAGGCTCTATCTCAGTGGGTGCTGCACTTTGAAAGGTGATGGCAAAGATTCCTGGATTTTTGATATTGATGAGACCCTTTTGTCCACAATTCCTTATTATAAGAAGCATGGTTTTGGGGGAGAAAAGTTGAATTTAACATCTTTAGAAGCATGGATGAAGCAAAGCAAGGCACCGGCTCTTGATCACACATTGGAGCTCTTTCATGAAATAAAGAACAGAGGCTTCAAAATCTTTCTGGTTTCTTCAAGAAAGGAAAGCCTTAGATCTGCCACAGTAGACAACCTAGTCAATGTTGGGTACCATGGTTGGACTACTCTTAAATTGAGGGGTTTTGATGATGAATTGGTGGAAGTAAAAAACTACCATTGTAAGGTGAGAGAAGAATTGGTTGATGAGGGTTATCGCATATGGGGCATTGTTGGAGATCAATGGAGCACTTTTGATGGACTTCCTATCCCAAACAGAACATTCAAACTACCAAATTCCATTTACTACAAAGCATAA 825 0.4158 MAKCLALSLIILGLFIGLLSPQWNILNLGWGKRVEEVNPEWNILNRILREKVVGDNLKSYCESWRINVELNNIRGFSVVPQECVEHVKKYMTSSQYKADSTRAVEEIRLYLSGCCTLKGDGKDSWIFDIDETLLSTIPYYKKHGFGGEKLNLTSLEAWMKQSKAPALDHTLELFHEIKNRGFKIFLVSSRKESLRSATVDNLVNVGYHGWTTLKLRGFDDELVEVKNYHCKVREELVDEGYRIWGIVGDQWSTFDGLPIPNRTFKLPNSIYYKA 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g02678 274 FunFam Vegetative storage protein 1 57 274 - -
Vimu6g02678 274 SUPERFAMILY HAD-like 116 257 IPR036412 -
Vimu6g02678 274 PIRSF VSP 10 274 IPR014403 -
Vimu6g02678 274 PANTHER ACID PHOSPHATASE-LIKE PROTEIN 53 273 - -
Vimu6g02678 274 Pfam HAD superfamily, subfamily IIIB (Acid phosphatase) 57 273 IPR005519 -
Vimu6g02678 274 NCBIfam plant acid phosphatase 54 272 IPR010028 GO:0003993
Vimu6g02678 274 Gene3D - 57 274 IPR023214 -
Vimu6g02678 274 CDD HAD_VSP 87 272 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g02678 Vimu-Chr6 23394944 23396747 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g02678 - - gmx:100811100 481.485
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g02678 6 23394944 23396747 Vimu6g02678 6 23394944 23396747 ECH