Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g02674 ATGGGTACACTCAAAACAAAACACCACATTCACACGCTCCTCTTTCTCACTGCACTCATCTTTTTCCTTTCCACACCAACATCCCTTGCAGACAACACAAACTTGATCTACAAGGGTTGCGCAGACCAGAAACTGCAACAACCCTACTCGCAGAATCTCAAACCCCTGTTATCTTCCTTGCTGGCAGAGTCTGCGCAAAAGGGTTTCGCCGCCACTACGCAGAACGGGCTCACCGGCGCCTACCAATGCCGAGGAGACCTCACCAGCTCCGACTGCCACAGCTGCGTCGCCAAGATTCCGGACATGCTGGGGCGCCTCTGCGGCGAGGCGGCTGCGGCGGCGCGAGTCCAGCTCAGCGGGTGCTACCTGCGGTACGAGGTGGTCGGGTTCAAGCAGGTTGCAGCGACTCAACTCCTGTACAAGGTTTGTGGGGCCCGTAGGGTTGTAGACGGCGGAGGGTTCGAGGCGAGGAGGGACGCGGCGTTTGGGATGGTGGAGAACGGCGTGCAGAGCAGTGGGAACTTGTTCTACACTGGGAGTTACCAGAGCCTCTATGTGTTGGGACAGTGCGAAGGTAATTTGGGAAATGCAGATTGCGGGGATTGTATCAGGAGTGCCGCGGAACAGGCTAAGGATCAGTGTGGCTACTCTATTTCCGCGCAGGTTTATCTTCAGAATTGTTACATCAGTTACAGCTTTTACCCCAACGGAGTTCCCACCTCTTCTTCTTCCTCAGGATCAGAGGGAGGAGGGCATCCGCACACGGAGAGGACGGTGGCGCTCGCGGTGGGTGGGGTGGCGGCTCTGGGATTCTTGATCGTTTGCATGCTATTTCTGAAGTCGGTGTTAAAGAGAAGAGGTGGGAAGCGTTAG 873 0.5613 MGTLKTKHHIHTLLFLTALIFFLSTPTSLADNTNLIYKGCADQKLQQPYSQNLKPLLSSLLAESAQKGFAATTQNGLTGAYQCRGDLTSSDCHSCVAKIPDMLGRLCGEAAAAARVQLSGCYLRYEVVGFKQVAATQLLYKVCGARRVVDGGGFEARRDAAFGMVENGVQSSGNLFYTGSYQSLYVLGQCEGNLGNADCGDCIRSAAEQAKDQCGYSISAQVYLQNCYISYSFYPNGVPTSSSSSGSEGGGHPHTERTVALAVGGVAALGFLIVCMLFLKSVLKRRGGKR 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g02674 290 ProSiteProfiles Gnk2-homologous domain profile. 31 130 IPR002902 -
Vimu6g02674 290 FunFam cysteine-rich repeat secretory protein 3 136 235 - -
Vimu6g02674 290 Pfam Salt stress response/antifungal 174 233 IPR002902 -
Vimu6g02674 290 Pfam Salt stress response/antifungal 44 126 IPR002902 -
Vimu6g02674 290 Gene3D - 134 235 IPR038408 -
Vimu6g02674 290 Gene3D - 32 130 IPR038408 -
Vimu6g02674 290 PANTHER ANTIFUNGAL PROTEIN GINKBILOBIN-2-LIKE 13 282 - -
Vimu6g02674 290 ProSiteProfiles Gnk2-homologous domain profile. 136 236 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g02674 Vimu-Chr6 23368042 23369167 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu6g02674 5 232 Receptor kinase-like Gene Family AT5G40380 26.860 3.24e-12 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g02674 - - gmx:100786830 456.062
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g02674 6 23368042 23369167 Vimu6g02674 6 23368042 23369167 ECH