Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g02649 ATGGACTCAAAAGGAGATGCTGAACCTCAGGAGGAGAGGCCTTCATCACCAATGAGGGTCCTGCAGCATTTTTCTGGGAGCGCATTCAAAGTTGCTGGGGAAGCATTGCATATATCACCAATGGGGCCTGGTGGGCATAGACGTTGTCAAAGTGAGCTTGGTAGCAGAGGAGTTGAACGTAATAACAGCTTGCAGAAATTAAAATCTCACGTGAACAGGGCTTGGCGCTGGGGTGGCAAATCCCGCGAAGATGCTCTCTCGAATTTCAACCCTGAGGTCATGGCAAACCAGAAACGGCAGTGGTATCAGCTTCATCCTAAAAGTCTGGATTGTGTAAATAATAAGGAGCCGACATCGCTCTTTGAACATTTTGTGATTGTGGGGCTGCATCCAGATGCTAATTTGGAAGCCGTGGAGCATTCATTTGCAAGAAGGAAAAAGTGGGAAAATGATAAGGGGAAACCTGAATTTCGAGATTGCAGAAAGTCTCAGCAGCAAAAATTAACAGAGCCAACTTTGGAACCTCAGTTACTGTTCAAATATCCTCCTACAAAGAAGCTAACAATGCGTATGAAGGATTTAGCTCCCTTTTGCTTTCCTGAAGGTGTTAAGGCATGGTTGTTGGAGAGGACTCCATCTCTTAGTGAACTAAACGAACTTGTCTATGGACAGGAACATTTAGGAAAAGATGATCTTTCATTCGTCTTTGCAGTCAAGGCAGCAGACAATACAACACTCTATGGAGTTTGTTTACATGTGCCTGAAATTGTTCAAAGGCCCCCTGGTATCTTAGGCATATCTTCTCCTTTTTCTCATCCCTCCATGGGATGCAGCCGTTTTCTGGTTTCTGCACCTCGCTGCTATTGTCTTCTGACTAGAGTTCCCTTCTTTGAGTTACACTTTGAGATGTTAAACAGTATCATTGCACAGGAGCGCCTGAATCGGATAACAGAGTTTATAAATGAGATGAGTCTCAGTGGCAGCGTTCCATCATCTCCCAAACTAGATTACCAAATGAGGTCAAAGGAGGAAAAATCCCCAGAGAACGAGACATTTAGTGAATGGATGGATTCTGCAATTCCTCTTGATGGTGCAGCCGCTATTGCTGCTGCAGCTGCTGGGATTATATCAGATGATGAAAGCCAACAGTTATCACCTAAAATACGGGACTATCGCTGTCAATCTCCTGTAAGTGGGAGTGCCAGTGATTCAGATTCGTCTCAGTTCAGGGATACAGATAAGGAGGACAAGAAGAATCTCCAAGTTATAGATAATTGTGTGTTTAAGGCACCAGAAACTCTTGGTTCTATAAAAAGAATGCATGGAAATTGCAAAAATGACCAAGCTTCTCCGAAACATGGAACACCTTTGTCTTCTCAGACTCGTGTCTTGGAGCGTCTTGGAAGTTTTGAATCACTTTTCAGTCCAGTTAGAAGCAGGGCATCAGAAGATGAGGACGATTTTTTCTCAAACAACGAAAGAGATTATGGGGATGAATTGTTAATGGAATGGGCTATGGAGAATAAGAATGATTTGCTACAGATAGTGTGTAGATACCATGCTCAACCTATTCCACCTCGAGGAAGTGATTTTGTCTTCCACCCTCTTGAACATCTACAAGCTATTCAGTACATACGACATTCAGTTGCTGCTCTTGGCTTCGGAGATGATTGTTCAAACTGTTCTGAAACAGCTCTGGACAATACGAAGCTGGCAGCGGCTGAGGAAGCCCTATCATTATCAGTATGGACAATGGCAACTACATGTCGAGTTCTGTCCCTTGATAGTGTGATGACATTGATTACAGGAGTGTTGTTGGAAAAACAGGTAGTAATAGTGTGCCCAAATCTGGGTGTTCTATCTGCCACAGTGCTTTCTCTTATACCCATGATTCGTCCTTTTCAGTGGCAGAGTTTATTGCTCCCAGTTTTACCTGGGACAATGATGGATTTTCTTGATGCCCCAGTTCCATATATTGTTGGCATACAACATAAACCAGATTACTTGAATGCGAGAACTACTAATCGTGTTCTTGTTGATATACAGAAGGACAAGGTGACATTGTGTCCATTACCAAAACTTCCACAGCATAGAGAGCTTTTCTCTCAGTTGAGTCCAATTCATGCTAGACTTTCAAATCAACGATCAATTGCTAAAAAGCATCCTGTACATAGGTGCAACGAAGTCCAGGCCGAAGCTGCAACTCAGTTTTTGAATATATTGTGGCACTATTTGGAGTCTCTTTGTTCAAATCTGAAATCCCACACGATAACTAATGTACAATCTAATAAAGATAGGGTTTCTTTACTTCTTAAAGATAGCTTCATTGATTCCTTTCCTGCTAGGGATCAACCCTTCATTAAGCCTTTTGTAGATACACAGCTCTTCACTGTTTTATCAGACTCTCGTTTGACAAGCTTTGAGAGTGGAGAGTCGTAG 2439 0.426 MDSKGDAEPQEERPSSPMRVLQHFSGSAFKVAGEALHISPMGPGGHRRCQSELGSRGVERNNSLQKLKSHVNRAWRWGGKSREDALSNFNPEVMANQKRQWYQLHPKSLDCVNNKEPTSLFEHFVIVGLHPDANLEAVEHSFARRKKWENDKGKPEFRDCRKSQQQKLTEPTLEPQLLFKYPPTKKLTMRMKDLAPFCFPEGVKAWLLERTPSLSELNELVYGQEHLGKDDLSFVFAVKAADNTTLYGVCLHVPEIVQRPPGILGISSPFSHPSMGCSRFLVSAPRCYCLLTRVPFFELHFEMLNSIIAQERLNRITEFINEMSLSGSVPSSPKLDYQMRSKEEKSPENETFSEWMDSAIPLDGAAAIAAAAAGIISDDESQQLSPKIRDYRCQSPVSGSASDSDSSQFRDTDKEDKKNLQVIDNCVFKAPETLGSIKRMHGNCKNDQASPKHGTPLSSQTRVLERLGSFESLFSPVRSRASEDEDDFFSNNERDYGDELLMEWAMENKNDLLQIVCRYHAQPIPPRGSDFVFHPLEHLQAIQYIRHSVAALGFGDDCSNCSETALDNTKLAAAEEALSLSVWTMATTCRVLSLDSVMTLITGVLLEKQVVIVCPNLGVLSATVLSLIPMIRPFQWQSLLLPVLPGTMMDFLDAPVPYIVGIQHKPDYLNARTTNRVLVDIQKDKVTLCPLPKLPQHRELFSQLSPIHARLSNQRSIAKKHPVHRCNEVQAEAATQFLNILWHYLESLCSNLKSHTITNVQSNKDRVSLLLKDSFIDSFPARDQPFIKPFVDTQLFTVLSDSRLTSFESGES 812
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g02649 812 ProSiteProfiles Tripartite DENN domain profile. 157 810 IPR037516 -
Vimu6g02649 812 MobiDBLite consensus disorder prediction 337 351 - -
Vimu6g02649 812 Pfam uDENN domain 175 253 IPR005113 -
Vimu6g02649 812 SMART uDENN_cls 117 254 IPR005113 -
Vimu6g02649 812 MobiDBLite consensus disorder prediction 392 416 - -
Vimu6g02649 812 Gene3D - 108 332 - -
Vimu6g02649 812 PANTHER DENN DOMAIN-CONTAINING PROTEIN 2 55 807 - -
Vimu6g02649 812 MobiDBLite consensus disorder prediction 326 351 - -
Vimu6g02649 812 Gene3D - 581 746 IPR043153 -
Vimu6g02649 812 Pfam DENN (AEX-3) domain 581 683 IPR001194 -
Vimu6g02649 812 SMART DENN_cls 283 684 IPR001194 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g02649 Vimu-Chr6 23164656 23175727 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g02649 - - pvu:PHAVU_001G167000g 1326.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g02649 6 23164656 23175727 Vimu6g02649 6 23164656 23175727 ECH