Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g02559 ATGATTTCCGAACCTGCGAGTTCCCTGAGAAAGAGGGCCGCCCAAGACCGACGCCTCAGCATCATCGACGTTTCTTCCGCCGATGACTCGCTTCTCGAAGGAAACGCTCTCCATCACCATTCAGAAAATCAAGCGAACGGGGATTTGTTGTGCACCCCGAACTCGAAGAATTTCGAAGACGCCGCCATCAAAGTCCAGCAGTGGGAGCACGAGCCTCACTCCAATGGCGCGTACGGAAGCGAAAAACCTAAGAAAAATAGCAAATGCAATTTGCGCAAGAGTTTGGCCTGGGACAGTGCCTTTTTCACCAGCGCCGGGGTTTTGGATGCTGAGGAGTTGTCCAGTATAATTGAAGGCGTTGAGAAGGATGAGAAGCATGAATTACCTGATATACAAGAGGATGTGTACAAGTCGTGTGAGTCCATATCTACTTTAGCGAGTGATAGTTTGACTTTTGAGAGTGCGGAGGTGGAGGGTGATTTGTTTGAGGATGTAAGAGCTTCAATTCAGAAATCTAGCCGAAAGTCCAGCCCTGCTGGTGCAAAAACTAAAGTCCCATCTTCTCCTGCGGTTCCAGGGTTCCAAACTCATGACTCTTCCAAAAAAGTTGGCATGGTTTCTCGCAACAAGATGAAGGCCCCACCTGGTTCTAAGAATCTAAGTTCAGGCACGCAAGGATTTGGGAAGACAACGAAAAAGAATAATCCTATTTTTCCACAACTTCCACAGCCTGCCGCTACAAGGAGAGATTCGTCTATTTTAAGGCAATCAAAGGTACTACCAAAGCCTAGTTTAAGTTCCACAACTTCTTCCAAGAGAGAATCCCTTGGCAATCTACATGTTAAAGCTGAAAGGGACAAGGCAAAACGAATAATTGGTGCTAGAGTCAGTTCAGTGACAAAAACATCTGTTGTTGGAGGTTCTCGATGCATTGTGCCTAAGCCCACACTACCATCCAAATTATCTGCGGGACCGACGGTGCCAACCAGGACTAAATCAGTGGCTTCCACATCTTCCGCTGTTAGAACGCCTTCAAGAATAGCTCCAAGAAATAAAGCTGAACCTGAGATTTCTAGTCTTTCAAGCATGATGTCTGCAACAAAGCTTTCTTCTAGTATTTCACCTGCTAGTTCTATCAGTGACTGGTCTTCGTCAGAATCATCTTCAACAATTTCGATGGCTAAACGTGTATGTAATAGTTCAAGGTCCAGCATCGATAGTGGCTCAAGCAGGAAGGTTTTATTGGATGCTGATGCAGATCAAGGTACACATTCTCACATTCCTCAGAATGATCCAAGCTTAGAAAGGCAAGAGGATCAGCATCGTGGGTTAACTAGTCAAAAGGAAAGGACAACTCCTGGAGTGGCAGTTCTTCCTCCAGCTCCCAAGAAACCATCAGGCCTTCGTCTGCCTTCGCCAAAAATTGGTTTCTTTGATGGGGTGAAGCCCTTAGTGCGCACGCCACGTGGGGGGACGCAACCACGCTCTGTTGTACCTGGTAACTTGCCAAAACATGGAGCTCTAAGTCCAAATGAAGGCCAACACAAAACAGAACTTGGAAAGCTTCATGATTCTAAATCTATCGTGTCAATTGAAAATACAAAATCCATTAACCAGCAAGCTCCACATCCAAATTCTTTTCTCGAATCGCCAGATGTTGCAATCAAGACATCTAATGGTGCGCAGAATAAAAGCTCTTCCGACTTGCCCTTGGGTGCTGATGAAAATACATCACTCATCCATGTAGTGGAGAAAACTAATCATGACTTGCTACCACTTAAAGGTGTCAATAACCAGGCAAATGCTCATCATGATGATCAAATTGATAGTTTGAGCAAACAAGTGGGACATATGGACATACATTTTGAGACGCGGGAAAAGTTTAACCATGATTCCCTTTCTTTATTGCAGACTGATATCAGCTCCCAAGACTCTAATGGTCTGGAGTTATCTAATCACGTAGAGATTATTAATCGTCCTAAGAAAGAGGAATCACTGAAGAGTTCTTCTACTCCATGTCTCCCTGTCTCCCCAACCAATTTTGATGTGTCCGCTTTAGAGAGGAGTCCCTTTGTAGTCAAGGATTCCTTTTGCAATATGGATGGCGTTGTCTTGACAGAATCAACAGTTTCAGAAACAAAATCGACGACCAACTTGCCTGTGCCAGATAGCATTAATATGAAGGAAAACAACTAA 2196 0.4463 MISEPASSLRKRAAQDRRLSIIDVSSADDSLLEGNALHHHSENQANGDLLCTPNSKNFEDAAIKVQQWEHEPHSNGAYGSEKPKKNSKCNLRKSLAWDSAFFTSAGVLDAEELSSIIEGVEKDEKHELPDIQEDVYKSCESISTLASDSLTFESAEVEGDLFEDVRASIQKSSRKSSPAGAKTKVPSSPAVPGFQTHDSSKKVGMVSRNKMKAPPGSKNLSSGTQGFGKTTKKNNPIFPQLPQPAATRRDSSILRQSKVLPKPSLSSTTSSKRESLGNLHVKAERDKAKRIIGARVSSVTKTSVVGGSRCIVPKPTLPSKLSAGPTVPTRTKSVASTSSAVRTPSRIAPRNKAEPEISSLSSMMSATKLSSSISPASSISDWSSSESSSTISMAKRVCNSSRSSIDSGSSRKVLLDADADQGTHSHIPQNDPSLERQEDQHRGLTSQKERTTPGVAVLPPAPKKPSGLRLPSPKIGFFDGVKPLVRTPRGGTQPRSVVPGNLPKHGALSPNEGQHKTELGKLHDSKSIVSIENTKSINQQAPHPNSFLESPDVAIKTSNGAQNKSSSDLPLGADENTSLIHVVEKTNHDLLPLKGVNNQANAHHDDQIDSLSKQVGHMDIHFETREKFNHDSLSLLQTDISSQDSNGLELSNHVEIINRPKKEESLKSSSTPCLPVSPTNFDVSALERSPFVVKDSFCNMDGVVLTESTVSETKSTTNLPVPDSINMKENN 731
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g02559 731 MobiDBLite consensus disorder prediction 431 446 - -
Vimu6g02559 731 PANTHER OS05G0121800 PROTEIN 16 670 IPR045882 GO:0008017
Vimu6g02559 731 MobiDBLite consensus disorder prediction 171 195 - -
Vimu6g02559 731 MobiDBLite consensus disorder prediction 214 276 - -
Vimu6g02559 731 MobiDBLite consensus disorder prediction 322 345 - -
Vimu6g02559 731 MobiDBLite consensus disorder prediction 171 285 - -
Vimu6g02559 731 MobiDBLite consensus disorder prediction 308 360 - -
Vimu6g02559 731 MobiDBLite consensus disorder prediction 418 519 - -
Vimu6g02559 731 MobiDBLite consensus disorder prediction 710 731 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g02559 Vimu-Chr6 22242702 22246460 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g02559 - - vra:106756818 1327
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g02559 6 22242702 22246460 Vimu6g02559 6 22242702 22246460 ECH