Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g02528 ATGGACACCAAGGCTTTCTTCGATCTCCACATCCTCAATGCCTCCATCGCCAGGCGCGTCCTTTTACGCTCCATCCTCCTCGCCTGCGCCATCTCCATCGTCTCTCTCTACCGCGCGCAGTCGCTCTTCGATTTCGCTCCCATCGCGACCTACTTTGACTGCGTTTCCGGTTTCCATGGCGTCACTTTCCGCCCTGCTTCTCAATTTCTCCGGACCCACTTCTGGGTTCCGGTCAATTGCGGGAAAGACGCCAACTTGACCCTCACCGTGGTCTCCGAGCTCACCGGTAACCGGTTGCTCTACCCCGGAGCGAAGAGTCTCTTCGTTGGAGAAGGATCTTCGATGGCCGTCGTGGCAATGAAACAGTTAGGCTTCTCCGCCGTCAGCGCCGTCCAAACGCGCAGTTTCGAGCAGAAGGAGGTCTTGTACGAGGATTCTTCTTTCGATTTCGTGTTTTCCAGGGACCTCGACAAGGTATCTGTCCCTGCTCTGTTGGTTCTCGAGATTGAACGTGTTCTTAAGCCTGGCGGGATTGGCGCCTTTATTGTCGGTAGCTCTGGTTCGCATCCCAATGATTTAATAAGGGCAGCCACCCCTGTTTCCTCTTTGTTAAGATCTTCCAATGTGGTGCATGTTGATTATGTCAATGAGCTTAACCTTGTTGTTTTCAAGAAAAGATATGACAATGCTACGTTTTATCAACATAATTTACCAGCTGATTGTCCCAGCCTCACCTTCACCAAACCCCTCATAGAGTTGATGGAGCCTCTTGTGAGTGAGAAACAGAAAGCACCACCTCCTGAGTTTCACAAGAACATTCCCTATTTGCCTAAGTTTGTGGATGTTTCAAGTAGGAAGAGGTTGGTGTATATTGATATTGGGGTGGGGGAGCTGCTTAATGCCAATGTCAATGATTGGTTCCTGCCATCATACCCTGTTGATCAGAAAGATTTCAATGTTTACTTTGTTCACTACAACACTTCCATCATGTTGTCCTACGTGAAGCGACCTGGTATTACCTTTGTTTATCACCCTGGCTTGGCCGGTATTGGGAAGGTCACTGCTAAACTTGGAACAGATGATAATGATGATGATCTGGATTCTTTCCTTGGGGAGGAGGAGTTTGATTTCCTTGCCTGGTTCAGAGAAACTGTGCAATATGCTGATTTTGTAGTCCTCAAGATGAATGCAGGAAATGTTGAACTCAAGTTCCTGTCTGATATATTTGAGAATGGAGCTATATGCTTTGTTGATGAGTTGTTTCTCAAATGTCCCGAGAGGAGAGGTAATGATAAAAGTGTAAGCAGCAGCATGGAAAGTTGTATGGATATTTACAAGGGTCTCAGAAACAATGGTGTCTATGTCCACCAATGGTGGGGAGACTAA 1386 0.474 MDTKAFFDLHILNASIARRVLLRSILLACAISIVSLYRAQSLFDFAPIATYFDCVSGFHGVTFRPASQFLRTHFWVPVNCGKDANLTLTVVSELTGNRLLYPGAKSLFVGEGSSMAVVAMKQLGFSAVSAVQTRSFEQKEVLYEDSSFDFVFSRDLDKVSVPALLVLEIERVLKPGGIGAFIVGSSGSHPNDLIRAATPVSSLLRSSNVVHVDYVNELNLVVFKKRYDNATFYQHNLPADCPSLTFTKPLIELMEPLVSEKQKAPPPEFHKNIPYLPKFVDVSSRKRLVYIDIGVGELLNANVNDWFLPSYPVDQKDFNVYFVHYNTSIMLSYVKRPGITFVYHPGLAGIGKVTAKLGTDDNDDDLDSFLGEEEFDFLAWFRETVQYADFVVLKMNAGNVELKFLSDIFENGAICFVDELFLKCPERRGNDKSVSSSMESCMDIYKGLRNNGVYVHQWWGD 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g02528 461 Pfam Methyltransferase domain 137 179 IPR013216 GO:0008168
Vimu6g02528 461 PANTHER PEPTIDE UPSTREAM PROTEIN 1 461 - -
Vimu6g02528 461 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 120 190 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g02528 Vimu-Chr6 22027030 22028415 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g02528 - - gmx:100806816 746.117