Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g02518 ATGGGGAAGTGCGCGCGTGCCAACTGCCCCGGCAAGAAGAGTAGCTATCAAGATGCTGCCATCGAGCTCGGCAATGAACTGGTCTCAAGGAACATCGATCTGGTGTATGGAGGGGGAAGCATTGGTCTAATGGGTTTAGTTTCTCAAGCTGTTCATGATGGCGGTCGCCATGTCATTGGAGTTATTCCCAAGACGCTCATGCCTCGAGAGCTAACTGGTGAAACGGTGGGAGAAGTAAAAGCTGTTGCTGATATGCACCAAAGGAAGGCAGAGATGGCCAAACATTCAGATGCCTTTATTGCCTTACCAGGTGGATATGGGACTCTAGAGGAGCTTCTTGAAGTCATAACCTGGGCACAACTTGGGATTCATGACAAGCCGGTGGGATTAGTAAATGTTGATGGATACTTTAATTCCTTGCTGTCATTTATTGACAAAGCCGTGGAAGAGGGATTTATCAGTCCAAATGCTCGTCACATAATTGTATCAGCACCAACAGCAAAGGAGTTGGTGAAGAAATTGGAGGATTACGTTCCCTGCCATGAGGGTGTTGCTTCCAAGTTGAGCTGGCAGATAGAACAGCAGCTTGCATACCCTCAAGATTATGACATGTCAAGGTAG 621 0.475 MGKCARANCPGKKSSYQDAAIELGNELVSRNIDLVYGGGSIGLMGLVSQAVHDGGRHVIGVIPKTLMPRELTGETVGEVKAVADMHQRKAEMAKHSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLVNVDGYFNSLLSFIDKAVEEGFISPNARHIIVSAPTAKELVKKLEDYVPCHEGVASKLSWQIEQQLAYPQDYDMSR 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g02518 206 Gene3D - 4 176 - -
Vimu6g02518 206 SUPERFAMILY MCP/YpsA-like 10 177 - -
Vimu6g02518 206 FunFam CASP-like protein 3 176 - -
Vimu6g02518 206 NCBIfam Rossman fold protein, TIGR00730 family 9 177 IPR005269 GO:0009691|GO:0016787
Vimu6g02518 206 PANTHER LOG FAMILY PROTEIN YJL055W 8 202 - -
Vimu6g02518 206 Pfam Possible lysine decarboxylase 44 174 IPR031100 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g02518 Vimu-Chr6 21956098 21960202 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g02518 K22522 - gmx:100810030 394.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g02518 6 21956098 21960202 Vimu6g02518 6 21956098 21960202 ECH