Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g02506 ATGCTTACGTTCATGCACTGGCTAGAAACAGGAAGCCTTCTCGAGCACAGAGAGGATGAGGAAAAACTTGGGTTGGGTTCAGACTTTGGTCTAGATGTTGAAGACTACTTAACAGGTGTCTGTTTTATGTCTAATGAATTGCCAAGGTATGTGGTGAATCAAGTGACAGCTGGGAATTACGATTGTCCAAAGAAGGTCTTAAAGTTCTTGACAGACCTCCATGCTGCATTTCGTATGCTTAATCTTCGAAATGATTTTTTGCGAAAGAAATTTGATGGCATGAAGTATGACCTAAGAAAAGTAGAAGAAGTTTATTATGATGTTAAAATTCGGGGTTTGGAGATCAAGGAACCAAAGGACAATCGTTTGTTGTGA 375 0.3947 MLTFMHWLETGSLLEHREDEEKLGLGSDFGLDVEDYLTGVCFMSNELPRYVVNQVTAGNYDCPKKVLKFLTDLHAAFRMLNLRNDFLRKKFDGMKYDLRKVEEVYYDVKIRGLEIKEPKDNRLL 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g02506 124 Gene3D Translin; domain 2 29 123 IPR016069 GO:0043565
Vimu6g02506 124 SUPERFAMILY Translin 2 114 IPR036081 GO:0043565
Vimu6g02506 124 CDD Translin 2 112 IPR033956 GO:0003697|GO:0003723|GO:0016070
Vimu6g02506 124 Pfam Translin family 2 112 IPR002848 GO:0043565
Vimu6g02506 124 PANTHER TRANSLIN AND TRANSLIN ASSOCIATED PROTEIN X 2 119 IPR002848 GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g02506 Vimu-Chr6 21803649 21805356 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g02506 - - gmx:100811968 221.861
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g02506 6 21803649 21805356 Vimu6g02506 6 21803649 21805356 ECH