Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g02503 ATGGTTTTATACGAGCATTCGGATGTTTTTCAGTGGGGTCTTAATCTTCTTGATGGTGACCCTGCTTATAGTCCTGGATACTATGGTAACATAATTCAACATGATACTGGAGACATCTATAATGGACACTACTTCCATAGCCATTATGATAATGAATGCAACCATGTAGAGAATGATGAGATCATTGCCCGTACACTTCAAGAAGAGTTTTCACAGCTAGAGATTGCTGAATCTTCAGGATATTTTCAGCAAGGTGAACAACAGTTCCATGTTCCTGAGACTCAGCCTCCATATGATTGGCATAACTCTTCAATGATGAACTACTGCTCAGGAGATCATGATTATGCTCAAGAAGGAGTTGGTGATGGAGAACCCTCTAGTTCATGTTCTAGTCCTTGTGAAACAGAGGAATATTCATTGGAGCTAACTGACAATTATCCACTTGATGATGAAGTTGGGAGGAGATTGAGTCAAATGATACCAATTCCCCATGTTCCAAAAATTAATGGTGAAATTCCTTCAATTGACGAAGCAACTTCAGATCATCAAAGGCTTCTGGATAGATTGCTGCTATATGACTTTGTGGAGAACAAAGTACATGGCGATGGTAATTGTCAGTTCCGAGCACTGTCTGATCAATTGTATCACGCACCTGATCACCACAAGTTTGTGAGACGACAAGTTGTCGATCAGACCCTTTTGCTTGGTTTTATCCTAAATGGAACTAGGAGTGGCGAATGGGGTGATCATGTTACTCTCCAAGCAGCTGCAGATTCGTATGGTGTGAGAATTTTTGTGATGACTTCTTTCAAGGACACCTGTTGCATAGAGATACTTCCTCATTTTGAGAACCCAAAAGGAGTTTCTGGGCTGAGGTGCACTACAACTCCATTTATCCCCAAGGAGATATACCATCAAATGAATCTAGAAAGAAGAAAAGGTGGTGGAGCTTTGGCAGCAAGCATTAGAGTCTTAGCTGAGCCTGTGAGCACGCACCATTTTGAACCTGTACAATTTTCCTTGAAGGTGATTATGATGGTTAAAGATGGAGCAGGAAATGATTATTTTGAAATTTTGATAAGGTGTGCAAAAAATATTGTGGAGGTGCAGGAAGTAAAAGCCCTTCTGGAATAA 1134 0.4056 MVLYEHSDVFQWGLNLLDGDPAYSPGYYGNIIQHDTGDIYNGHYFHSHYDNECNHVENDEIIARTLQEEFSQLEIAESSGYFQQGEQQFHVPETQPPYDWHNSSMMNYCSGDHDYAQEGVGDGEPSSSCSSPCETEEYSLELTDNYPLDDEVGRRLSQMIPIPHVPKINGEIPSIDEATSDHQRLLDRLLLYDFVENKVHGDGNCQFRALSDQLYHAPDHHKFVRRQVVDQTLLLGFILNGTRSGEWGDHVTLQAAADSYGVRIFVMTSFKDTCCIEILPHFENPKGVSGLRCTTTPFIPKEIYHQMNLERRKGGGALAASIRVLAEPVSTHHFEPVQFSLKVIMMVKDGAGNDYFEILIRCAKNIVEVQEVKALLE 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g02503 377 Gene3D - 176 233 - -
Vimu6g02503 377 Gene3D - 237 295 - -
Vimu6g02503 377 PANTHER OTU DOMAIN CONTAINING PROTEIN 54 283 - -
Vimu6g02503 377 SUPERFAMILY Cysteine proteinases 180 278 IPR038765 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g02503 Vimu-Chr6 21782147 21787217 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g02503 - - aip:107648617 459.144
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g02503 6 21782147 21787217 Vimu3g02734 3 41669605 41677484 ECH
Vimu6g02503 6 21782147 21787217 Vimu6g02503 6 21782147 21787217 ECH
Vimu3g01237 3 21649839 21651765 Vimu6g02503 6 21782147 21787217 ECH
Vimu6g02503 6 21782147 21787217 Vimu3g01237 3 21649839 21651765 PCT