Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g02501 ATGGGTCGTTTCCGCTACCTCTGTCTGTCTTATTGCATATATGAGGCATACACAAAGCCTGGACCAGTGCTTGTGTCCTTCCCAGTGGGCAAGATCAGTACACTACTTGCCAGAACAAAATCATTCATGGCAGTGAAGGAAAGCAACACAAGCCAAAATATTCAGCTGCAGCAGCAGCAGCAGCAGCAGCAAGAAGCTTGTGATCCTTGCAAGTCTTTTGGCCAAAAGTGCAGTCACTTAGTCAAGAAGCAGCGTGCCAAATTCTACATTCTTCGCCGCTGCATCGCCATGCTTTTGTGTTGGCATGAGCGTGGGGTAGGAATAGGAATAGGTAGGATAGTAGGGTGGATGGGGATTAGTGAAGGGAGTGGGGTCATAAGAGGAGACAGCAAGAATCGTAATGTGGGTAGCAGCCAAGGTGCTCCTCTGGCCCTCAGTCTGACCCTCACTCTCGTGCACCCTCACTTCTCTTTTCCTGCACTGTGGGCTCTCTCCTTTTACATCCTTCAGCGTTCAGGGCGTAGCAGATTAGATCCGCCTCTCCAAGCCGTTTGGTTGGCTTGGAGATCCTTCTCTCTCTGTCACGAACAAGCTGATAGTTTCTCAAATCAACACCAGCAGCTTTTCCATGACTTCCCTCGCCAGACATATCATCTGTGTCATCACCAAGTCCCACCGGCCGTGCCAGCTCCATTAGTAGTATGCTCCACCTCCACGAGAATCTTCTTCTCACTTCCAGAGTTTTCCGGGTGCATCGCCATCCTTGTTTCATCAAAAATGACATCCCTACTAATGATTAGTTTTGAAGCCGCCGATGGAGGTGCCCTCACCGTCACACCCGATTCTCTTGAATCTGTTTGGCCGGTGGAAGTAGAGGCAGCACAACAAGGCGGTGAGGTTCTCGCATTAGGAGTGTGGCGCTTGCAGCAGACCTCTTTGATGAAGGAAAACTCCGTCGAGATTCGTAAACAGCAGAACAAGGCGTCTTTGGATGTTCTTTTTTGGTTGGTTTATTGTATTAGTAGGAGGGCTGCTCTTGGGCTCCGTTTTTGGCTCGTGGATCTGAAATTGGATCTGATTTTTGTTCCAGACAGGGGTCTGTTGAAGATTACAGAGGAGGAGTTTTCAGGGCCTCCATTTAGCGTGGTGATTGAGCTGTTTGTTGGGCTGCTGCTTTGTTTCTGGGCTGCGCTCACTGTGCCCGGGAAGTTTAAATCCATACTCCCTCACTCCGAGGAGAACAGTGGATGTCTTCCACGATGGTTTAGAATGGAGATTCTAGGAGTTCTGTTACCGGAGTCCATTATTAGGGGCCACTTAAGTTACTCCTGTCAAGTTCTGCATTCATACTCTGTTGTTGGATTATGGGTGGCGGGGATTGTCTCTTTACCTGCCAACCTAGACTTCATGATCTTCAATCACCGAGGCAAGGTCTTTCCTGTGGAACTGGATGTGAAGCTGAGACAATGA 1470 0.4912 MGRFRYLCLSYCIYEAYTKPGPVLVSFPVGKISTLLARTKSFMAVKESNTSQNIQLQQQQQQQQEACDPCKSFGQKCSHLVKKQRAKFYILRRCIAMLLCWHERGVGIGIGRIVGWMGISEGSGVIRGDSKNRNVGSSQGAPLALSLTLTLVHPHFSFPALWALSFYILQRSGRSRLDPPLQAVWLAWRSFSLCHEQADSFSNQHQQLFHDFPRQTYHLCHHQVPPAVPAPLVVCSTSTRIFFSLPEFSGCIAILVSSKMTSLLMISFEAADGGALTVTPDSLESVWPVEVEAAQQGGEVLALGVWRLQQTSLMKENSVEIRKQQNKASLDVLFWLVYCISRRAALGLRFWLVDLKLDLIFVPDRGLLKITEEEFSGPPFSVVIELFVGLLLCFWAALTVPGKFKSILPHSEENSGCLPRWFRMEILGVLLPESIIRGHLSYSCQVLHSYSVVGLWVAGIVSLPANLDFMIFNHRGKVFPVELDVKLRQ 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g02501 489 Pfam DVL family 82 100 IPR012552 GO:0008285
Vimu6g02501 489 PANTHER DVL19-RELATED-RELATED 49 104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g02501 Vimu-Chr6 21760102 21775009 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g02501 K23566 - pvu:PHAVU_001G178700g 128.642