Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g02488 ATGGAAACTTTCCTCTTCACCTCAGAATCTGTTAACGAAGGGCATCCGGACAAGTTGTGTGACCCAGACAGTAAGGTGGCGTGTGAAACCTGTACAAAAACTAACATGGTTATGGTGTTTGGCGAGATAACAACCAAGGCCAATGAGAAAGTGATCAAACCCGTCATCCCAGCCAAATATATAGATGACACAACTATCTTCCACCTCAACCCCTCTGGTAGGTTTGTCATTGGTGGACCACATGGAGATGCAGGACTCACTGGAAGGAAGATCATTATAGACACCTATGGCGGTTGGGGTGCTCATGGCGGCGGTGCCTTCTCTGGCAAGGACCCAACCAAGGTTGATAGGAGTGGCGCATACATTGTCAGGCAAGCAGCCAAGAGTGTGGTAGCTTCAGGACTTGCTCGACGTTGTATTGTGCAGGTTTCTTATGCAATTGGAGTCCCAGAGCCCCTTTCAGTGTTTGTGGACACATACAAAACGGGAAAGATTCCAGACAAGGATATCTTGGCTCTGATCAAGGAGAAGTTTGACTTCAGGCCAGGAATGATTGCCATCAATCTTGATCTCATGAGAGGAGGCAACAGCAGGTACTTGAAAACTGCTGCTTATGGGCATTTTGGACGTGATGATCCTGATTTCACTTGGGAGACCGTGAAAATCCTCAAGCCAAATGCATAA 684 0.4737 METFLFTSESVNEGHPDKLCDPDSKVACETCTKTNMVMVFGEITTKANEKVIKPVIPAKYIDDTTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSVVASGLARRCIVQVSYAIGVPEPLSVFVDTYKTGKIPDKDILALIKEKFDFRPGMIAINLDLMRGGNSRYLKTAAYGHFGRDDPDFTWETVKILKPNA 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g02488 227 FunFam S-adenosylmethionine synthase 98 218 - -
Vimu6g02488 227 Pfam S-adenosylmethionine synthetase, C-terminal domain 77 218 IPR022630 GO:0004478|GO:0006556
Vimu6g02488 227 SUPERFAMILY S-adenosylmethionine synthetase 77 223 IPR022636 GO:0004478|GO:0006556
Vimu6g02488 227 ProSitePatterns S-adenosylmethionine synthase signature 2. 103 111 IPR022631 GO:0004478|GO:0006556
Vimu6g02488 227 PANTHER S-ADENOSYLMETHIONINE SYNTHETASE 2 48 IPR002133 GO:0004478|GO:0005524|GO:0006556
Vimu6g02488 227 Gene3D - 11 110 - -
Vimu6g02488 227 Gene3D - 111 225 - -
Vimu6g02488 227 Pfam S-adenosylmethionine synthetase, N-terminal domain 4 53 IPR022628 GO:0004478|GO:0006556
Vimu6g02488 227 SUPERFAMILY S-adenosylmethionine synthetase 3 63 IPR022636 GO:0004478|GO:0006556
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g02488 Vimu-Chr6 21622371 21623543 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g02488 K00789 - gmx:100794248 342.428
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g02488 6 21622371 21623543 Vimu6g02488 6 21622371 21623543 ECH