Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g02487 ATGGAGGGAAGCTCAAGCATGGTGAGCAACCAGCATGACAAGGCAAAGAAAGGGTTGGAAGGCAGTGCCTTAGCTTTACCGATCAACCGTTATGCCAATTTGAAAAGCGCTACCAGCGACGACGACTTCACCAATCTTCTCGCACTCATCAAATCCTCCAAAACCCCCGCTGTTATCAATTATGGCGCTTCTTGGTGCCGCGTCTGTAGCCAAATTCTCCCAGCATTCTGCAGACTAAGCAATAATTTTCCAAAGCTTACCTTTGTGTACGCAGACATTGATGAATGCCCGGAAACAACTCAACACATTCGCTACACGCCAACCTTCCAATTTTACAGGAATGGTGAAAAGGTAGATGAGATGTATGGCACTGGAGAAGAGAGGCTCCATGATCGCCTGTGGTTGCACTCTTAA 414 0.4734 MEGSSSMVSNQHDKAKKGLEGSALALPINRYANLKSATSDDDFTNLLALIKSSKTPAVINYGASWCRVCSQILPAFCRLSNNFPKLTFVYADIDECPETTQHIRYTPTFQFYRNGEKVDEMYGTGEERLHDRLWLHS 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g02487 137 Gene3D Glutaredoxin 22 135 - -
Vimu6g02487 137 CDD TRX_family 45 123 - -
Vimu6g02487 137 PANTHER THIOREDOXIN-LIKE 3-3 10 137 IPR044193 -
Vimu6g02487 137 Pfam Thioredoxin 48 129 IPR013766 -
Vimu6g02487 137 SUPERFAMILY Thioredoxin-like 33 130 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g02487 Vimu-Chr6 21620238 21621607 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g02487 K03671 - gmx:100305694 232.261
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g02487 6 21620238 21621607 Vimu6g02487 6 21620238 21621607 ECH