Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g02456 ATGGCCAAGAAGAGAACCACACCTCACAGCAACAACAATCAGAAGAGGAAGATCCAATTGATAATTCGCATGCCAAAACATTCTCAACAGCCAAGAAGCTCACCTCCCAAGCGTCGCACTGATTTCTCTGTGTTCACACGCACTCCCTCCTCCTTCTCTAACCCTGCTTCTGGTACCTTTTATGCTTCTTATCAAATAAGGGCTTTTCAATTTTCTTCTTTAGTCTACTGCTTCCTGAATTTGGTTTCGCTAGTGCCATTCGAGCAATTCCCCGCATTTAGTTCTTCTTCTGCTTTTCTGTTTGGTTCGTCTTCTGGTGAAGTGAGGTTGAGCAATGTCACTGCAAGAAGTTTGCAGGGGAAGGGAATGACAACAAAACAAATTTCTGAAAATACAATGGTTCGAAGCAGCATTTACCAAGAGGGTAGACCAGTATGTTCATCTGAGTTTTCTGATGCTGGAGTTATGGAAGTTGATTCAGCTGTCCGAGATGAAAGCCTTGATCTTGGTTGCAATAGGGATGATTGCAATGAAAAATATGATATTTCCAAGATGTTTGAATCTATAGCTCTTGAATCATCTGTCAGTGATAGCAGTTCTCTAGCTGCAACTACTGGAAGCGTTGTATGGGCAAGGACAGGGTGTCAATTGTGGTGGCCTGCTGAGATCATGGAAGAAACATCTGCGTTATCCAAACCTGGTAGTGATGGGCATGTTTTAGTGCATTTTTATGGAAATCTTCCCAGTGCCTGGATTGATCCAATGACAGATATTTCAACTTTTGAGGAGTCGTTTGAAGCAAGGAGCAATAACCCTTCAGAAGATTTTCAACAGGCTTTAAAGCAAGCATTGCAGAAGAAGGCACAACTTAGTTCTTGCCAAAAGTTGACCGCTGATAGTTCTCCTCAATCTGATATGCAAGAACGTCCATTTGGTACCGTCTTGATTTATACTCTAAATTATTTTGTGTATAGTGAAGTGAGATGCCACAACAAGGAACACAATGGGGGATGCCACAGTATAGAAAATAAACTATTTTCAACCTCTATCACGACCCTCACTGTGACAAATGATGATTCAACTAGAGAATTTTCAATTTCACATAGGCTTATTGTCAATCATCATCCCGTTCCATTCCATATGGTTGATTTTGCATTAGAGTTTGAAGATTTAATGATACTCTTTCAAGTGTCTTTTGAGATCACTTTCAATGAGAAACTATTGTCAACTAGAAAACTTGTCAAGATATGGTTTGTTGTGTATGTCACTGATATGTGTTGGGTCTATTTATGCCCAGCTCCTTCCACTGACATCCCTAGCATCCCTTCTTTGGCGTGCATACTTTTCCATCTATTTTCTATCACTTCCTTCACTGTTGCTCTATTGTTGTTAGCTTTTCAAACTACAACCCCACTATTTGAGTTACCTTGCCTAGTTGACCGTTGCATTGTTGGAGTTGTGGCATTAGAGCAGCCATGCACTCTCATGGACCCCTTGATGCTGTTGTATAACTGCCCTTCTAGAACGACAAGCAAAACAAGTGATGATTTTCAAGAGAGACGAAGAGGGAAAAGGGAACGTAAACCCAAAGTTCACTTTGATGAGGTTACATATCCAGTGAAATCAGAAAGAAAGCTTCGTCGGTTAAAGATAATGCGGTACCTCGGCCTTGCAGCTCCAATTGGTTCTCCCTTTTGA 1698 0.4111 MAKKRTTPHSNNNQKRKIQLIIRMPKHSQQPRSSPPKRRTDFSVFTRTPSSFSNPASGTFYASYQIRAFQFSSLVYCFLNLVSLVPFEQFPAFSSSSAFLFGSSSGEVRLSNVTARSLQGKGMTTKQISENTMVRSSIYQEGRPVCSSEFSDAGVMEVDSAVRDESLDLGCNRDDCNEKYDISKMFESIALESSVSDSSSLAATTGSVVWARTGCQLWWPAEIMEETSALSKPGSDGHVLVHFYGNLPSAWIDPMTDISTFEESFEARSNNPSEDFQQALKQALQKKAQLSSCQKLTADSSPQSDMQERPFGTVLIYTLNYFVYSEVRCHNKEHNGGCHSIENKLFSTSITTLTVTNDDSTREFSISHRLIVNHHPVPFHMVDFALEFEDLMILFQVSFEITFNEKLLSTRKLVKIWFVVYVTDMCWVYLCPAPSTDIPSIPSLACILFHLFSITSFTVALLLLAFQTTTPLFELPCLVDRCIVGVVALEQPCTLMDPLMLLYNCPSRTTSKTSDDFQERRRGKRERKPKVHFDEVTYPVKSERKLRRLKIMRYLGLAAPIGSPF 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g02456 565 CDD PWWP 206 284 - -
Vimu6g02456 565 Gene3D - 193 297 - -
Vimu6g02456 565 Pfam PWWP domain 206 285 IPR000313 -
Vimu6g02456 565 MobiDBLite consensus disorder prediction 26 41 - -
Vimu6g02456 565 SUPERFAMILY Tudor/PWWP/MBT 204 294 - -
Vimu6g02456 565 PANTHER PWWP DOMAIN-CONTAINING PROTEIN 94 297 - -
Vimu6g02456 565 MobiDBLite consensus disorder prediction 22 41 - -
Vimu6g02456 565 ProSiteProfiles PWWP domain profile. 205 263 IPR000313 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g02456 - - pvu:PHAVU_001G181700g 429.869