Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g02454 ATGGCTTCCTCAACCTTGATTCCCGCATCCGAGGCCGTGCAGGTTCTTCTCTCCTTGCTCGCCGATGACTCTTCCTCCGTCAGAGAGGCCTCCATGTCCTCTCTCAAGAACATTGCCGCACTGAATCCTCTTCTCGTTCTTGATTGCTGTACCGTCGTGTCGCGTGGTGGACGTCGGCGGTTCGGGAACATGGCTGGAGTTTTCCAAGTGATGGCGTTCGGCGTTCGGTCTCTTGACACAAGAGACGTCGATTCTGCTTTCATGGCGAAGCTAGCTAAGATTGCTACAGCTGAGCTGATATCCTCTAAGGAACTAAATTCTGACTGGCAACGAGCAGCAACAAGCTTACTTGTTGCAATAGGCTCACATTTACCTGATCTCATGATGGAAGAAATTTTTCTTCATTTATCTGGGACAAATTCAGCAGTACAGGCTATGGTTCAAATCCTTGCAGAATTTGCTTCTACCGATCCCATGCAGTTCATTCCACGTTGGAAAGGTGTACTTTCCCGAATTTTGCCAATTCTTGGAAATGTACGAGAAATGCATCGCCCCATTTTTGCAAACGCATTTAAGTGTTGGTGTCAAGCATCTTGGCAATATAGTATAGACTTTCCTTCACATTTTCCTCAAGATGCTGATGTCATGTCATTTCTAAATTCAGCTTTTGAGCTTTTGTTGAGAGTTTGGGCAGCTTCAAGAGACCTTAAGGTTCGTGTGGCATCTGTAGAAGCACTGGGGCAGATGGTAGGTCTCATAACACGAGCACAGTTAAAGACTGCCCTACCAAGGCTTATCCCTACAATATTGGACTTGTATAAAAAAGATCAAGATATAGCTTTTTTGGCTACATGCAGTCTCCACAATCTGCTAAATGCCTCTTTGTTGTCCGAAAGTGGTCCTCCTATGCTTGATTTTGAGGTTTGGCTAAGCATTTTGGTGTTATGTGTTACCTTGTTTCTTGGGTTAGTTCTTGTTGAGATTTCTGAGGCTTCATTATTGAGCCCTAATAGGCATGCTGTCTGGTTGACAGTGCAACAACTGTTAGAAACTGGTGGTCAAGATTTATCGTCCCTTAAAACAGCTGACACATTTCTTATTTTATCTTCTAGATGCTTTACGAATCACCATTTCAAGGATGATTTGACTATTGTTTTATCAACACTTCTACCTGTGATATCTACGAATAATGATGGCAAAGACCAATCAGATTTCTCTGTGGGACTAAAGATTGAGGGAAGAACCATTGACTTTTGGTGCTCTTTGCATTTTGAAGCATCTTTTGCCAAGGTTCCTGCCTCCTCTATTCCTGATGTCGAAGCTGTAAAGTCCTTGCTTGAGGAGCAGAATTTAGCTGTTCGAAAGGCACTATCTGAGTTAATTGTGGTTATGGCTTCTCACTGTTACTTGGTTGGTTCGTCTGGAGAGTTGTTCATTGAATATCTTGTACGCCATTGTGCTATAACTGATCACAATAGGAGTGATCTTGAGAACATACCAAACAAGAGAATAGAGATGAAAATTGGAGCAGTTACTCCTAGTGAGTTAAGAGCAGTTTGTGAAAAAGGTCTGCTTTTGGTAACTATTACGATTCCTGAAATGGAGCATATTCTTTGGCCTTTTCTGTTGAGGATGATTATTCCACGAACCTACACTGGTGCTGTGGCCACGGTGTGCAGGTGTATCTCAGAATTGTGGCGGCATAGGTCATATAGCAACGATATGTTGAGTGAGTGTAAAACCCGTCCTGATATACCAATTGCTGAGGAACTTCTTGCTCGCTTGGTGGTGCTTTTGCATAATCCTCTGGCAAGGGAACAATTGGCCACTCAAATTTTGACAATTCCAAAGATGAAGGCATATGTTAGTGATACAGAGGACTTAAAGCAGGATCCATCATATCAAGACACTTGGGATGACATGATTATCAATTTTCTTGCAGAATCTTTGGATGTGATTCAAGATGCAGATTGGGTTATGTCTCTTGGAAATGTTTTTGCCAAACATTATGAACTTTATGCTTCTGATGATCAACACACTGCACTTCTGCACCGGTGCCTAGGCATTCTGCTTCAAAAGGTTAACGAAAGAGCTTATGTCCGTGATAAAATAAATTGGATGTACAAGCAGGCAAACATTGCAATTCCAACAAACAGACTTGGATTGGCAAAAGCAATGGGATTGGTTGCTGCATCACACTTGGATACAGTGTTGGACAAGCTGAAGGACATTTTAGACAATGTTGGGCAAGGCATATTTCAGAGGCCAAATCCCGATTCTGTCTTGAGTCCGTTACCTACCCTTCCATCAGATAGTTTCAGAACGGAAGAGTCTGATGACATTCATGCTGCTTTGGCACTAATGTATGGATATGCTGCAAAGTATGCTCCATCAACAGTTATTGAAGCCAGAATAAATGCCCTTGTTGGCACCAATGTGCTCTCACGACTCCTTCATGTGCGTCATCCCAAAGCAAAGCAAGCGGTCATCACAGCAATTGATTTACTAGGTAATGCTGTTATTAATGCTGCTGAAAGTGGCTCACCATTTCCACTGAAAAGAAGGGACCAACTGCTTGATTATATTTTAACTTTAATGGGTCGGGATGATGAAGATGGTTTTGCTGATTACAATGACCTATTGCGTACTCAGGCCCTTGCTATAAGTGCCTGCACCACTTTGGTCTCTGTGGAACCAAAGCTAACAGTTGAAACTAGGAACCATGTAATGAAGGCTACATTGGGGTTCTTTGCTATACCAAATGATCCAGTTGATATTGTCAATCCCCTTATAGACAACTTGATTACCCTTTTATGTGCAATTCTTCTCTCTGGGTTATTTAATCATCCAAGTTTCCTGATGAATTTGACAGGCCACATTGGGGTTCTTTGCTATACCAAATGA 2904 0.4236 MASSTLIPASEAVQVLLSLLADDSSSVREASMSSLKNIAALNPLLVLDCCTVVSRGGRRRFGNMAGVFQVMAFGVRSLDTRDVDSAFMAKLAKIATAELISSKELNSDWQRAATSLLVAIGSHLPDLMMEEIFLHLSGTNSAVQAMVQILAEFASTDPMQFIPRWKGVLSRILPILGNVREMHRPIFANAFKCWCQASWQYSIDFPSHFPQDADVMSFLNSAFELLLRVWAASRDLKVRVASVEALGQMVGLITRAQLKTALPRLIPTILDLYKKDQDIAFLATCSLHNLLNASLLSESGPPMLDFEVWLSILVLCVTLFLGLVLVEISEASLLSPNRHAVWLTVQQLLETGGQDLSSLKTADTFLILSSRCFTNHHFKDDLTIVLSTLLPVISTNNDGKDQSDFSVGLKIEGRTIDFWCSLHFEASFAKVPASSIPDVEAVKSLLEEQNLAVRKALSELIVVMASHCYLVGSSGELFIEYLVRHCAITDHNRSDLENIPNKRIEMKIGAVTPSELRAVCEKGLLLVTITIPEMEHILWPFLLRMIIPRTYTGAVATVCRCISELWRHRSYSNDMLSECKTRPDIPIAEELLARLVVLLHNPLAREQLATQILTIPKMKAYVSDTEDLKQDPSYQDTWDDMIINFLAESLDVIQDADWVMSLGNVFAKHYELYASDDQHTALLHRCLGILLQKVNERAYVRDKINWMYKQANIAIPTNRLGLAKAMGLVAASHLDTVLDKLKDILDNVGQGIFQRPNPDSVLSPLPTLPSDSFRTEESDDIHAALALMYGYAAKYAPSTVIEARINALVGTNVLSRLLHVRHPKAKQAVITAIDLLGNAVINAAESGSPFPLKRRDQLLDYILTLMGRDDEDGFADYNDLLRTQALAISACTTLVSVEPKLTVETRNHVMKATLGFFAIPNDPVDIVNPLIDNLITLLCAILLSGLFNHPSFLMNLTGHIGVLCYTK 967
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g02454 967 SUPERFAMILY ARM repeat 11 944 IPR016024 -
Vimu6g02454 967 Gene3D - 2 316 IPR011989 -
Vimu6g02454 967 PANTHER MAESTRO-RELATED HEAT DOMAIN-CONTAINING 53 944 IPR045206 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g02454 K24816 - psom:113309723 1132.09