Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g02431 ATGAAGATCCTCCAGAAAGATTTCGCCCTCAACCAAACCGGAACTGCAAAGCTCATGGCTGAAGAACCCGACGACGTGTGGGTCCTCTACAACCTCATCCTCCCCGGTGACGTCGTTTCAGCCGACACCACGCGCAAGGTTCACCACGATTCCTCCACCAAGAAAAACACAGCATCACGTGTCAAGCTCACCCTCCACCTCAAAGTCACGTGCCGAGATTTCCACAAAGACTCCTCTACCCTCCGCCTCCAAGGCCGCAACCTCCACCACAACCAACACGTGGCCGCAGGCTCCTTCCACACCCTCTCCCTCGAACCCAACAAACCCTTCCTCCTCCGAAAAAATCTCTGGCAAAACGACGCCGTCCAAACCCTCAACGACACCACCCGAAAAGAATGTTCCAAATCAAATTCCACTTCCATTCCCGACCTTGCCGTCGTTCTTTTCCACCCTCACCGCGCCGAGATCTACCTCGTCGCAGAAGGAGACAACACGCACTGCACCAAGGTCGAAGCCTGTCCCAACTCCAGGAAAAACGGAAAAGTTTCTTCGTCCGTGTTTTTCCGCCGAGTGTTGGCGGCTTTGGTGAAGCGCGTGGATTTCAAGGTTTTGAGGGGCGTTGTGGTGACGAGCGAGGAGTTTCGTGCGTTTGCGGTGTCGGAAGCGAGGAAGATGGGGATACGGTGGATCGAGGATAACAAGACGAGCGTGGCGGTCGTGGAGGATGGTGATAGTTTGGAGAAAGTTTTGAGTGACCCGGCGGTGACGGTGTTGGTGAAGGACAGCAGGGTTAGGGCGTTTAGGGAGTTGTGGGAGATGGTGTGCAACGATTCGGGCCGCGCGTGTTATGGAGCCGAGGAAGTGGAGCGTGCGAAAGAAATGAAAGCGATTGAGACACTTTTGATTACTGATGATCTTTACAGGAACGAGGAAGTTGGTACGAGGCAGAGATACGATGATCTGGTGAAATCGGTGAAAGACGGTGGAGGAAAGGCTTTTGTGTATTCGGCGATGCATGTTTCGGCGTCGCAACTGTCACAGCTCACCGGCGTTGCCGCCATTCTCCGGTTTCCTTTGCCTGATCTCGAAGTCCAAGATTGA 1101 0.5413 MKILQKDFALNQTGTAKLMAEEPDDVWVLYNLILPGDVVSADTTRKVHHDSSTKKNTASRVKLTLHLKVTCRDFHKDSSTLRLQGRNLHHNQHVAAGSFHTLSLEPNKPFLLRKNLWQNDAVQTLNDTTRKECSKSNSTSIPDLAVVLFHPHRAEIYLVAEGDNTHCTKVEACPNSRKNGKVSSSVFFRRVLAALVKRVDFKVLRGVVVTSEEFRAFAVSEARKMGIRWIEDNKTSVAVVEDGDSLEKVLSDPAVTVLVKDSRVRAFRELWEMVCNDSGRACYGAEEVERAKEMKAIETLLITDDLYRNEEVGTRQRYDDLVKSVKDGGGKAFVYSAMHVSASQLSQLTGVAAILRFPLPDLEVQD 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g02431 366 Pfam eRF1 domain 1 1 127 IPR005140 -
Vimu6g02431 366 SUPERFAMILY Translational machinery components 142 263 - -
Vimu6g02431 366 FunFam Protein pelota homolog 260 366 - -
Vimu6g02431 366 SUPERFAMILY L30e-like 264 363 IPR029064 -
Vimu6g02431 366 SMART eRF1_1_2 1 130 IPR005140 -
Vimu6g02431 366 FunFam Protein pelota homolog 1 131 - -
Vimu6g02431 366 Gene3D - 261 366 IPR029064 -
Vimu6g02431 366 Gene3D eRF1 domain 2 142 259 IPR042226 -
Vimu6g02431 366 SUPERFAMILY Dom34/Pelota N-terminal domain-like 1 128 IPR038069 -
Vimu6g02431 366 Pfam eRF1 domain 3 266 359 IPR005142 -
Vimu6g02431 366 Gene3D Pelota, domain A 1 131 IPR038069 -
Vimu6g02431 366 PANTHER PELOTA 1 363 IPR004405 GO:0070481|GO:0070966|GO:0071025
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g02431 Vimu-Chr6 21213524 21214624 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g02431 K06965 - gmx:100803618 521.546
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g02431 6 21213524 21214624 Vimu6g02431 6 21213524 21214624 ECH