Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g02426 ATGGGGAGGAGTAGCGGAAGAGACCGAAGACGAAGAAGATCCGATGAGTCGGAATCCGAGTCACCGTCCGATTCCGACTCGGACCGACGCCATCGTAGCAGTAGCCGCGGGTCTAGGCGTGACTCAGACGGAGATAGGAAGAAGAAGAAGAAATCCTCGATGAACATCACAGAAGAGGAAATCGCGCAGTACATGACCAAAAGGGCCCAATCGAAGGCTATGAAAGTGGCAAAAAAGTTGAAAACCAGTACGGTGTCAGGCTATTCCAACGATTCGAACCCGTTCGGTGACTCCAATCTCAATGAGAAGTTTGTTTGGCGCAAGAAGATTGAACGCGACGTTTCTCAAGGTGTGTCTATTGATACGTTTTCTGTTAAGGCCGAGAAAAAAAGACAGATAGAAAGGATGCTAAACGTTCTCACTTCTATGATAACAATATTGCAGGCAGAAATTGAAAAAGTGAAAAAGAGAAGAGAGGAAAGGGCACTCGAGAAAGCTCGGCACGAGGAAGAAATGGCACTGTTAGCTAGAGAACGTGCTCGAGCTGAGTTTCAGGACTGGGAAAAAAAGGAAGAAGAGTTCCATTTTGATCAAAGCAAAGTTAGGTCAGAAATTAGATTGCGTGAAGGGCGTGCTAGACCAATTGATGTCCTAACCAAGCATCTCAACGGCTCTGATGATTTGGATATAGAAATAAATGAACCATATATGGTCTTCAAGGGTTTGACTGTAAACGAAATGAACGAGCTACGAGATGACATCAAAATGCATTTGGACCTTGACAGGGCAACACCAACTCATGTAGAATATTGGGAGGCACTCCTTCTGGTGTGTGATTGGGAGCTAGCAGAAGTACGAAAAAAGGATGCGTTTGACCGAGCTAGAGTGCGAGGAGAAGAACCTCCTGCCGAGCTGCTTGCAGAAGAAAGGGGATTGCATTCCAGTGTTGAGCCAGATGTAAAGAGGCTTTTGCAGGGGAAGACACGTGCAGAATTGGAGGCTTTACAGGTTCACATTGAATCAGAAATGCGTTCTGGTACAGCAAAGGTGGTTGAATACTGGGAGGCCATTTTAAAACATCTCCACATTTATAAAGCCAAGGCTTGTTTAAAGGAAATTCATGCTAAATTGCTACGTAAGCATTTGCAATCTCTAGAGAGACCATTGGAGGATGAAGATAAATTGGAGGATGCTAATGTTATGATACCTGACGAGGAGGAAGATATAGAGGATGATATTAAAGTCCGATCTCTAGATGAATCATTTTCACCAGAACCCATTAGAGGGGAACAAGATGAAGACGAGGCTGGATCATTTTCGCCACAACTGTTGCATGGTGATGAAAGTGAGGAAGCTATTGACCCTGAAGAGGATAGAGCAATGCTGGAGCGGAACCGCAAGGCTGTCTTAGAAGAACAGCAAAGACGAGTTCAGGAAGCAATGATATCAAAGCCAGCTCCTTCTGAAGATAATTTTGAGATGAAGGCTTTAAAAGCTATGGGGGATATGGAAGATGGAGATGCGGTGTTTGGATCTGGTGCTGAAGTGAGCCTGGATTCCCAGGTTTATTGGTGGCATGACAAATACAGGCCTAGGAAGCCGAAGTATTTCAACCGTGTTCACACTGGATACGAGTGGAACAAATATAATCAGACTCACTATGATCATGACAACCCACCTCCAAAGATTGTGCAGGGATACAAATTTAATATTTTCTATCCTGATCTTGTAGACAAGACAAAAGCCCCAACCTACACCATTGAGAAGGATGGCAGCAATGGGGAGACTTGCATTATCAGATTCCATGCTGGGCCACCGTACGAAGACATAGCTTTCCGCATCGTAAACAAAGAATGGGAATATTCTCACAAGAAGGGTTTTAAGTGCACATTTGAACGTGGAATTCTGCACGTGTACTTTAATTTCAAACGCCACCGCTACCGCAGATAA 1950 0.4451 MGRSSGRDRRRRRSDESESESPSDSDSDRRHRSSSRGSRRDSDGDRKKKKKSSMNITEEEIAQYMTKRAQSKAMKVAKKLKTSTVSGYSNDSNPFGDSNLNEKFVWRKKIERDVSQGVSIDTFSVKAEKKRQIERMLNVLTSMITILQAEIEKVKKRREERALEKARHEEEMALLARERARAEFQDWEKKEEEFHFDQSKVRSEIRLREGRARPIDVLTKHLNGSDDLDIEINEPYMVFKGLTVNEMNELRDDIKMHLDLDRATPTHVEYWEALLLVCDWELAEVRKKDAFDRARVRGEEPPAELLAEERGLHSSVEPDVKRLLQGKTRAELEALQVHIESEMRSGTAKVVEYWEAILKHLHIYKAKACLKEIHAKLLRKHLQSLERPLEDEDKLEDANVMIPDEEEDIEDDIKVRSLDESFSPEPIRGEQDEDEAGSFSPQLLHGDESEEAIDPEEDRAMLERNRKAVLEEQQRRVQEAMISKPAPSEDNFEMKALKAMGDMEDGDAVFGSGAEVSLDSQVYWWHDKYRPRKPKYFNRVHTGYEWNKYNQTHYDHDNPPPKIVQGYKFNIFYPDLVDKTKAPTYTIEKDGSNGETCIIRFHAGPPYEDIAFRIVNKEWEYSHKKGFKCTFERGILHVYFNFKRHRYRR 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g02426 649 PANTHER POLYGLUTAMINE BINDING PROTEIN 1/MARVEL MEMBRANE-ASSOCIATING DOMAIN CONTAINING 3 36 649 - -
Vimu6g02426 649 MobiDBLite consensus disorder prediction 396 457 - -
Vimu6g02426 649 MobiDBLite consensus disorder prediction 397 413 - -
Vimu6g02426 649 Pfam Conserved mid region of cactin 177 374 IPR018816 -
Vimu6g02426 649 SMART CactinC_cactus_3 525 649 - -
Vimu6g02426 649 Pfam Cactus-binding C-terminus of cactin protein 525 649 IPR019134 GO:0005515
Vimu6g02426 649 MobiDBLite consensus disorder prediction 414 435 - -
Vimu6g02426 649 MobiDBLite consensus disorder prediction 1 60 - -
Vimu6g02426 649 Coils Coil 137 185 - -
Vimu6g02426 649 MobiDBLite consensus disorder prediction 1 56 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g02426 Vimu-Chr6 21186678 21192938 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g02426 K25058 - gmx:100780087 1073.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g02426 6 21186678 21192938 Vimu6g02426 6 21186678 21192938 ECH