Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g02422 ATGGACGCACCTCGTAAGCAGCAGCTCGTTGTTAATTTCGCCGTTAAGGTGTCGCTGAGAGGAGCAAGTGCGAAGGAGATAACGCGAGACGCTCTTCTTCAGAAGGTCACTCAGGAAAGAGAACTTCGCAATTATGCAAAACGAGCTGCTGCTGCTGCTCTCTTCATTCAGAGAGTGTGGAGGCGCTTCAAGGTCACAAAGGCAGTTTCTCTGCAACTTCAGCAAGAGTGGGAGATAGCAGTGAATCATTATACTGGTGTAATGACAGCAGATTGGATTTCAAACAATTTGTTGAGACCATTTCTATTCTTTGTTACCCTTATCTCCACTCAGCGTCAGAAGGTCCACTGCAAGAGAATAGATTCTATCAAACTGTGCTTTACCGTCATATTGGAAAGCCTGAAATCTTCTGATTCAAAGCTGAACTTTTGCTTTTTGGCAATTGGTACAACTGAAGAAAGAAGAATATGGAGATACCAGGCACGCAAGCTGACTTTTCTTAGTTTTGTTATTCTTTCAGAGTTCAGTAAACGCCCTTCCGGGGCCCAAGATATTACTGTTGTTACATCTCTCGCCATGCGTATTCTTGTAATGTTAACTGATCTGAAAGGATGGAAAGGAATAACAAATGACAACCACTTTGATGCAGATTTAGCAGTGAAAGATTTAATTCAGTTCATGGGCAGTGATAAAAGTGGTTGTTATGTGTCTATTGGCAGATATATTAGTGCATTAGAAAATCCTTCTTCCCAGTCAAAGACCATCACCCAGGCAGATGGAAATTTTTTCATTACTGCAAGTGTAATAACTTTAGCTGTGCGGCCGTTTTATCTGATAAACTATGATGCAGAAGTGCCTCATACGCTGGATTTCAACTATGCTGCTGAGCAGTATATTCTTTATCTGCTGACTATACCTTGGCTAGTGCAACATCTCCCCCTTATTCTTCTACCAGCTTTAAAGCACAAATCTATTTTGTTTCCATGCTTCCAGACTCTATTGATTTTGAAAGAGAAAGTTTTGATGGAGATGTCAGAGTTTGTCAAATCAGAGATTGCTGTCTCTTTCAAGGCTATTCCATCAGTTGGTTGGGCCCTTGCTAACATTATCTGCTTAGCAACAGTGAATGAGAATGAATCCTTCAATGAAGGTTTAGACCATGGATTGTATGTCCATGTTGTTATTACTCTATCAGAGGCTCTGCTGTCTTGTCTTGATAATATTGGATGGGTCAGAAAGAAAAAGAAAGCCCTTCAAACTGATGAAAGTTCAATACACCCAGTTGATGCAGTTCAGCATGAGGGTGAAGCGACCAATGAATCCTTAATATTGTCATACATGGATCAATTTAGGCCTGTTTGTCAGCAGTGGCATCTCAAAATTCTTTTGGCATCAATTAATAGAGATTCCATAAACAAGGCTGAGACTGTGCCATCAAGTAGCCTGGAATGTCTGGGAAATCTAGAATTGTGTGATGTTGCACTTTTTTATTCTAATGTACTTAGAATATTTTCAGTCTTAAGTCCAATTCGTGGCTCATTATCAGTTCTCAACATGCTATCATTCACTCCTGGATTTCTTGTGAGATTGTGGAGTGTACTGGAGGGTTCCTTTTTTTCAGGAGACAAACATAATTTTGATAATTACATAAGTGAAAAAAGCAAACATAAAGCCTTTGAGAAGATGCAAAAACAAGTCAGTAAAGATGGGCCTAATAAGTGGGTCAATGTACTTCATAAATTTGCAGGTAGGTCACGAGCAGCAACAGATTGCACTGACTTTAATAGCAGTCACACTGAGCCTAGCAGACCAAATGACGAGTCATCAGATATATGGGACATAGAACCTATGAGGAATGGGCCGCAAGGCATTCCAAAGGATATGTTTGCTATGCTTCATCTTTTCTGTGCGACCTATTCTCACCTGCTTTTAGTTCTTGATGACATAGAGTTCTATGAGAAAAAGGTTCCATTCCAAATAGAGCAGCAAAGAAAAATTGCATCTATGCTCAATACATTGGTTTATAATGGCTTGTCCCATGTTGGTGGTCATCATAATAAGTCCCTAATGGATTGTGCTATCAGATGCTTACATTTACTGTATGAAAGGGATTGCAGGCACCCATTTTGTCCTCCTGATTTGTGGCTTTCTCCTGCTAGAAAAAGCCGGCCACCAATTGCTGTTGCTGCCAGAACTCATGAAGTTTTAGCAGCCAACCTGATACATGATGATTCATCAGCTTCACCGAGTGTTGGTTCTGCTGTCACTATTGTTCCTCACGTTTTCCCTTTTGAGGAGAGGTAA 2304 0.4049 MDAPRKQQLVVNFAVKVSLRGASAKEITRDALLQKVTQERELRNYAKRAAAAALFIQRVWRRFKVTKAVSLQLQQEWEIAVNHYTGVMTADWISNNLLRPFLFFVTLISTQRQKVHCKRIDSIKLCFTVILESLKSSDSKLNFCFLAIGTTEERRIWRYQARKLTFLSFVILSEFSKRPSGAQDITVVTSLAMRILVMLTDLKGWKGITNDNHFDADLAVKDLIQFMGSDKSGCYVSIGRYISALENPSSQSKTITQADGNFFITASVITLAVRPFYLINYDAEVPHTLDFNYAAEQYILYLLTIPWLVQHLPLILLPALKHKSILFPCFQTLLILKEKVLMEMSEFVKSEIAVSFKAIPSVGWALANIICLATVNENESFNEGLDHGLYVHVVITLSEALLSCLDNIGWVRKKKKALQTDESSIHPVDAVQHEGEATNESLILSYMDQFRPVCQQWHLKILLASINRDSINKAETVPSSSLECLGNLELCDVALFYSNVLRIFSVLSPIRGSLSVLNMLSFTPGFLVRLWSVLEGSFFSGDKHNFDNYISEKSKHKAFEKMQKQVSKDGPNKWVNVLHKFAGRSRAATDCTDFNSSHTEPSRPNDESSDIWDIEPMRNGPQGIPKDMFAMLHLFCATYSHLLLVLDDIEFYEKKVPFQIEQQRKIASMLNTLVYNGLSHVGGHHNKSLMDCAIRCLHLLYERDCRHPFCPPDLWLSPARKSRPPIAVAARTHEVLAANLIHDDSSASPSVGSAVTIVPHVFPFEER 767
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g02422 767 PANTHER UBIQUITIN-PROTEIN LIGASE E3C 16 767 IPR044611 GO:0000209|GO:0061630
Vimu6g02422 767 MobiDBLite consensus disorder prediction 590 611 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g02422 K10588 - gmx:100527169 1259.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g02422 6 21147436 21152272 Vimu6g02422 6 21147436 21152272 ECH