Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g02404 ATGGGGGGTGAAACGGTGAACGGGTCATGGTTCAGTTCTTTGTGGCCAGTCTCTCGGAAGAGTACATCATCGGATAACAAGGCTGTGGTGGGAATTTTGGCATTAGAAGTCACAGGGTTGATGTCGAAGGTGGTTAATTTATGGCAGTCTTTGAGTGATAGGGAGGTATTGAGTCTGAGGGAAGGGATTGTGAATTCAATTGGAGTCAAAATGCTGGTGTCTGACAATGATGATTACTTGATGGAACTTGCGATGAATGAGATACTTCATAACTTTCAATCTCTTGCACGCTCGGTGGCTAGGTTGGGTAAGAAATGCGTGGATCCGGTTTATCATCGTTTTGAACATTTTGTTCATAACCCAGCTCAATATTATTTTCAATGGTCTGGGTGGGAGTATAGGTGGAAAAAGATGGAGAGGAAAGTGAAGAAAATGGAAAAAATTATTGCTGCTACGACACATTTTTGCGAAGAGGTTGAGGTGCTAGCAGAGGTTGAACAGACTTTCAGAAGAATGCAGGCAAATCCGGAATTGCATCGGGTGAAATTGCTTGAGTTTCAGAAGAAGGTTATGTTGCAGCGGCAGGAAGTGAGAAATCTCAGAGACATGTCTCCATGGAATAGAAGTTATGATTATGTTGTCCGGTTGTTGGCGAGATCACTATTTACGATCATGGAGAGGATTGTACTTGTCTTTGAAAACAAACACCCACCAACTGTCCAACCACATAATGATTCTATGCATATGAGTTCTAACAATCTTCTGCGAAGTCATTCCTTTTCTGTTATGCATTCATCTGTTTATCCTTCAGAGACTAATCTCTATGGATTGAATTCAGGTACTGTTGGGGGGAGGCCGGTATTAAACTCGAGCTTTTTAGTAGGCAAGGGGAAAAGAACGAAGAGACAGCACCAGAAAGAAGAACCTCTTTTCTTCAGAAAGAACACACATTCAGAAAGCAAGCACTTAGGACATATTATGGGCTTCAAAGGTTGTATGTCTGCTGCAGATGGTTCTCCTGTCATACAGAGCTGTATGCAGACAAATGGTGGCTCCATGAGGTTGACTGATTGTCATTTGAAATCTGTTGATAAAATGAAAACAGTGAATGAGTTATCTCTCCCCAACAGAGTTAGAATGTATTCTAAGTTATCCATCAATAACCTGTTAAAGCCTGCTTCCAAATCCCTTGGTGATGCAGCTCTTGCACTGCATTATGCCAACATGATTGTATTGATTGAGAGGATGGTGACATCACCGCACCTGGTTGATCATGCCACAAGAGATGATCTATACAGTATGCTTCCAACTACTGTAAGAACTGCTCTAAGGGCTAAGCTTAAAAGTAAATCTTCCTCCAATCATCATGATGCAAACCTTGCTGCGGAATGGAGTCTGCTACTTGCACAGATGTTGGAATGGTTGGCCCCACTGGCACATAACATGATAAACTGGCATTCTGTGAGAAATTTTGAGAAGGAGAACTCAATTTTTAGCGCAAATGTTTTACTTGTTCAAACTCTTTACTTTGCAAACCAAGCAAGAACCGAGGCTGCAATAGTTGATCTTCTTGTTGGTCTTAACTATGTGTGCAGAATTGATACAAAAGTTGGCACAAGAGATACACAGGATTGTGCGAGGACTAGAACTTTTAATGGTGTTCGTTTAAGAAAGAATGGAATGTACAATGGAATTTTATAG 1701 0.4127 MGGETVNGSWFSSLWPVSRKSTSSDNKAVVGILALEVTGLMSKVVNLWQSLSDREVLSLREGIVNSIGVKMLVSDNDDYLMELAMNEILHNFQSLARSVARLGKKCVDPVYHRFEHFVHNPAQYYFQWSGWEYRWKKMERKVKKMEKIIAATTHFCEEVEVLAEVEQTFRRMQANPELHRVKLLEFQKKVMLQRQEVRNLRDMSPWNRSYDYVVRLLARSLFTIMERIVLVFENKHPPTVQPHNDSMHMSSNNLLRSHSFSVMHSSVYPSETNLYGLNSGTVGGRPVLNSSFLVGKGKRTKRQHQKEEPLFFRKNTHSESKHLGHIMGFKGCMSAADGSPVIQSCMQTNGGSMRLTDCHLKSVDKMKTVNELSLPNRVRMYSKLSINNLLKPASKSLGDAALALHYANMIVLIERMVTSPHLVDHATRDDLYSMLPTTVRTALRAKLKSKSSSNHHDANLAAEWSLLLAQMLEWLAPLAHNMINWHSVRNFEKENSIFSANVLLVQTLYFANQARTEAAIVDLLVGLNYVCRIDTKVGTRDTQDCARTRTFNGVRLRKNGMYNGIL 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g02404 566 Pfam Protein of unknown function (DUF668) 397 483 IPR007700 GO:0045927
Vimu6g02404 566 PANTHER BNAC09G50660D PROTEIN 24 543 - -
Vimu6g02404 566 Pfam Domain of unknown function (DUF3475) 32 88 IPR021864 GO:0045927
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g02404 Vimu-Chr6 21023413 21026491 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g02404 - - gmx:100809482 915.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g02404 6 21023413 21026491 Vimu6g02404 6 21023413 21026491 ECH