Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g02396 ATGGCTGCATCTCTAACTACATTCTCCAGGCTTATCTCTTCCACCACCGTCTCTCTCCTACCACCCAAAACCCTCACTTCCAAAATCTCTATTCGCCTTCCCGCTCGCCGCCACGCCAAGCCCCTCAGATTCTCCTCCTCCTCCCCCATCACCGCTGCCATCAGCGTCGGCGATAAGCTCCCGGAGGCCACCTTCTCCTACCTGGATTCGGATGGAGAGGTGAAGACGACGACGGTGTCGGAGCTGACGAAGGGGAAGAAGGCGGTGTTGTTCGCTGTGCCGGGCGCGTTCACTCCCACGTGCTCACAGAAGCACGTGCCGGGCTTCGTGGAGAAGTCGGGGGAGCTGAAGGCGAAGGGGGTGGAGACCATTGCATGCATTTCGGTGAACGATGCTTTCGTGATGAAGGCTTGGAAGGAGGACCTCAAGGTTAACGACGAGGTGCTCTTGTTGTCCGATGGAAACGGAACGTTCACGAAAGCCATTGGGTGCGAGCTCGATCTCAGCGACAAGCCCGTTGGGTTGGGGGTTAGGTCGAGGCGCTACGCTCTCTTGGCGGAGGATGGGGTTGTGAAGCTCTTCAATTTGGAGGAAGGGGGTGCCTTCACTTTCAGTGGCGCTCAGGACATTCTCGATGTCCTTTGA 645 0.5767 MAASLTTFSRLISSTTVSLLPPKTLTSKISIRLPARRHAKPLRFSSSSPITAAISVGDKLPEATFSYLDSDGEVKTTTVSELTKGKKAVLFAVPGAFTPTCSQKHVPGFVEKSGELKAKGVETIACISVNDAFVMKAWKEDLKVNDEVLLLSDGNGTFTKAIGCELDLSDKPVGLGVRSRRYALLAEDGVVKLFNLEEGGAFTFSGAQDILDVL 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g02396 214 FunFam Peroxiredoxin 52 214 - -
Vimu6g02396 214 SUPERFAMILY Thioredoxin-like 54 212 IPR036249 -
Vimu6g02396 214 CDD PRX5_like 56 211 IPR037944 GO:0008379|GO:0034599
Vimu6g02396 214 PANTHER PEROXIREDOXIN 51 212 IPR037944 GO:0008379|GO:0034599
Vimu6g02396 214 ProSiteProfiles Thioredoxin domain profile. 54 214 IPR013766 -
Vimu6g02396 214 Pfam Redoxin 56 198 IPR013740 GO:0016491
Vimu6g02396 214 Gene3D Glutaredoxin 52 214 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g02396 Vimu-Chr6 20976725 20982083 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g02396 - - gmx:100783307 359.377
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g02396 6 20976725 20982083 Vimu6g02396 6 20976725 20982083 ECH