Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g02395 ATGGCAACCATCGTGAGCATCAAGGCCCGTCAGATCTTTGACAGTCGTGGCAATCCAACCGTAGAGGTTGATTTGCTAGTCTCGGATGGTACTTTTGCTAGAGCTGCTGTTCCAAGTGGTGCATCCACTGGGATTTACGAGGCACTTGAATTGAGAGATGGCGGGTCCGACTACCTCGGAAAGGGTGTATCAAAGGCTGTTGACAACGTGAACAGCATTATTGCCCCTGCATTGATTGGCAAGGACCCAACTCAGCAGACAGCTATTGACAACTTAATGGTTCAACAGCTTGATGGAACTGTTAACGAATGGGGTTGGTGCAAGCAAAAGCTTGGAGCAAATGCCATATTGGCAGTGTCTCTTGCAGTCTGCAAAGCTGGTGCCAGCGTCCTGAAAATTCCTCTTTACAAGCATATTGCAAATCTTGCTGGTAACAAAAAGTTGGTTTTGCCTGTTCCTGCTTTCAACGTCATTAATGGTGGATCACATGCTGGAAACAAACTTGCTATGCAGGAGTTTATGGTTCTTCCCGTGGGAGCCTCCTCTTTCAAGGAAGCCATGAAGATGGGGGTTGAAGTATATCACCACTTGAAGTCTGTGATTAAGAAGAAATACGGCCAAGATGCAATAAATGTTGGTGACGAAGGTGGCTTTGCTCCAAACATTCAGGAAAATAAGGAAGGTTTGGAATTGCTCAACTCTGCCATTGCCAAAGCTGGCTACACAGGCAAAGTTGTCATTGGAATGGATGTTGCTGCTTCCGAATTCTACAAGGAGGACAAAACATACGATTTGAACTTCAAGGAAGATGACAACGATGGCTCACAGAGGATCTCTGGCGATGCTTTGAAAGATCTGTACAAGTCATTTGTGTCAGAGTACCCAATTGTGTCAATTGAGGATCCTTTTGACCAGGATGACTGGGAGCACTATACTAAGCTGACTGCTGAGGTTGGAACCAACGTACAAATTGTTGGTGATGATCTGTTGGTTACCAACCCCAAGAGGGTTCAGAAAGCAATCGATACCAAAGCATGCAATGCTCTTCTCCTCAAGGTCAATCAAATTGGTTCTGTGACCGAGAGTATTGAAGCTGTTAGGATGTCCAAAAAAGCTGGATGGGGTGTCATGACCAGTCACAGAAGGTTTGGATCTGTTTCTAAATCCTACAACTGTAAGATCTTCAGTAGTGGAGAAACCGAGGATACATTCATTGCTGACCTTGCTGTTGGTTTGTCAACGGGTCAAATTAAGACTGGAGCTCCATGCAGGTCAGAGCGTCTTGCTAAATATAACCAGCTCTTGAGAATTGAGGAGGAACTTGGTGCTGAAGCAGTGTATGCTGGAGCTAACTTCCGTACCCCTGTTGAACCATACTAG 1380 0.4543 MATIVSIKARQIFDSRGNPTVEVDLLVSDGTFARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVDNVNSIIAPALIGKDPTQQTAIDNLMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGASVLKIPLYKHIANLAGNKKLVLPVPAFNVINGGSHAGNKLAMQEFMVLPVGASSFKEAMKMGVEVYHHLKSVIKKKYGQDAINVGDEGGFAPNIQENKEGLELLNSAIAKAGYTGKVVIGMDVAASEFYKEDKTYDLNFKEDDNDGSQRISGDALKDLYKSFVSEYPIVSIEDPFDQDDWEHYTKLTAEVGTNVQIVGDDLLVTNPKRVQKAIDTKACNALLLKVNQIGSVTESIEAVRMSKKAGWGVMTSHRRFGSVSKSYNCKIFSSGETEDTFIADLAVGLSTGQIKTGAPCRSERLAKYNQLLRIEEELGAEAVYAGANFRTPVEPY 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g02395 459 PRINTS Enolase signature 326 337 IPR000941 GO:0000015|GO:0000287|GO:0004634|GO:0006096
Vimu6g02395 459 PRINTS Enolase signature 112 128 IPR000941 GO:0000015|GO:0000287|GO:0004634|GO:0006096
Vimu6g02395 459 PRINTS Enolase signature 37 51 IPR000941 GO:0000015|GO:0000287|GO:0004634|GO:0006096
Vimu6g02395 459 PRINTS Enolase signature 169 182 IPR000941 GO:0000015|GO:0000287|GO:0004634|GO:0006096
Vimu6g02395 459 PRINTS Enolase signature 349 363 IPR000941 GO:0000015|GO:0000287|GO:0004634|GO:0006096
Vimu6g02395 459 SFLD enolase 1 441 - -
Vimu6g02395 459 FunFam Enolase 1 133 457 - -
Vimu6g02395 459 CDD enolase 6 440 IPR000941 GO:0000015|GO:0000287|GO:0004634|GO:0006096
Vimu6g02395 459 SMART Enolase_C_3 147 455 IPR020810 -
Vimu6g02395 459 FunFam Enolase 1 132 - -
Vimu6g02395 459 Hamap Enolase [eno]. 2 441 IPR000941 GO:0000015|GO:0000287|GO:0004634|GO:0006096
Vimu6g02395 459 SUPERFAMILY Enolase C-terminal domain-like 147 454 IPR036849 -
Vimu6g02395 459 PIRSF Enolase 1 454 IPR000941 GO:0000015|GO:0000287|GO:0004634|GO:0006096
Vimu6g02395 459 SMART Enolase_N_3 4 139 IPR020811 -
Vimu6g02395 459 NCBIfam phosphopyruvate hydratase 4 453 IPR000941 GO:0000015|GO:0000287|GO:0004634|GO:0006096
Vimu6g02395 459 Gene3D - 133 458 IPR036849 -
Vimu6g02395 459 Gene3D - 1 131 IPR029017 -
Vimu6g02395 459 ProSitePatterns Enolase signature. 349 362 IPR020809 -
Vimu6g02395 459 Pfam Enolase, C-terminal TIM barrel domain 148 454 IPR020810 -
Vimu6g02395 459 SUPERFAMILY Enolase N-terminal domain-like 3 144 IPR029017 -
Vimu6g02395 459 SFLD enolase 1 441 IPR000941 GO:0000015|GO:0000287|GO:0004634|GO:0006096
Vimu6g02395 459 PANTHER ENOLASE 3 453 IPR000941 GO:0000015|GO:0000287|GO:0004634|GO:0006096
Vimu6g02395 459 Pfam Enolase, N-terminal domain 4 139 IPR020811 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g02395 Vimu-Chr6 20966083 20972022 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g02395 K01689 - gmx:100811084 841.262
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g02395 6 20966083 20972022 Vimu6g02395 6 20966083 20972022 ECH