Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g02385 ATGAGAGGCATAGCATCTTGTTACAACGAACATGCTATTAGAGTGTCCGATTCATATTGTTCAAGGCCTTCAAACCAGACCTATCTCTGTCCAAAACTGAATCCTTCCACCAGAGATTCAGTCACCTGCATGTACAAAATCTCAACGCAAAAACAACTCTTCATCACATTAACTTGGGCCAAGAAACTCCTAGGTCAAGCCTTCACCATAACCATCTCCAATTCCGATCATTTTCCCTCCAAATTCAACGCAAAGCAATTGAATAAAACCAAAGGAAACGAAACATTCCGAACCCACAATTTCCAAATCCAAGTCCTCTGGGATCTCTCCGACGCCAAGTACGAGGATGGGCCAGAACCGGTTAACGGATTTTACGTCGTCGTTTTGGTGGACTCCGAATTGGGTCTACGCCTCGGTGACAAAGATCCCTTGCTTGAAGAACAATCCGACACAAAGGAAGCGAATTTCTCAATGGTTTCAAGGAGTGAGACGTTTTCTGAAACAGCGGTTTACGCGACAAAGGCGAAATTTTGCGAGACGGGAATTTCTCATGACATATTGATAAAGTGCTGCGCGGAAGAGGGAGCGTCGAAGGGTCACGTGTTGTCCGTGTGGGTGGACAAGAAGACAGTGTTCCAGGTGAAAAGGTTGCGCTGGAACTTTCGTGGGAACCAAACAATCTTTGTGGATGGTTTGGTCGTGGATATGATGTGGGATGTGCATGATTGGCTTTTCAATCCCGATTCTGCTTCGGCCATGTTCATGTTCAGGACAAGGAGTGGCCTCGACAGTAGATTATGGTTGGAGGAGAAGACTACGCACACGCGCAACCAGCAGGACAAAATTGGGTTCTCCTTGTTCATACGTGCATGTAAGAACCTTGATTGA 888 0.4617 MRGIASCYNEHAIRVSDSYCSRPSNQTYLCPKLNPSTRDSVTCMYKISTQKQLFITLTWAKKLLGQAFTITISNSDHFPSKFNAKQLNKTKGNETFRTHNFQIQVLWDLSDAKYEDGPEPVNGFYVVVLVDSELGLRLGDKDPLLEEQSDTKEANFSMVSRSETFSETAVYATKAKFCETGISHDILIKCCAEEGASKGHVLSVWVDKKTVFQVKRLRWNFRGNQTIFVDGLVVDMMWDVHDWLFNPDSASAMFMFRTRSGLDSRLWLEEKTTHTRNQQDKIGFSLFIRACKNLD 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g02385 295 PANTHER EXPRESSED PROTEIN 4 292 IPR008586 -
Vimu6g02385 295 Pfam Plant protein of unknown function (DUF868) 37 292 IPR008586 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g02385 Vimu-Chr6 20856308 20857195 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu6g02385 1 293 EF-hand Containing Proteins AT5G28150 35.667 5.92e-54 176
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g02385 - - pvu:PHAVU_001G186900g 560.066
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g02385 6 20856308 20857195 Vimu6g02385 6 20856308 20857195 ECH