Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g02355 ATGGGAAGAAAATGCAGCAGAAGGTCTCTTATGGAGTTCCCAATCCTCCTCATACACACCCTATTCCTCCTTTTCTTCCCACTGCCTCTACTCTCCGAACACAACAATTTCGTTCGTCAGCCAGCTGGTCAACTCATCATCACACCACACCAACGCTCTCATTCTGATCCGCAACAGGTGCACATTTCATTGGTGGGGAAAGAGAAGATGAGGGTGTCGTGGATAACGGAAGAGAAGCATGCAGAATCTGTGGTGGAGTACGGAACAGAGTCAGGGGAATATAGCGCAAAATCAACGGGGGAGCATACCTCGTACCGATATTTTTTGTACAATTCCGGCAAGATTCACAACGTTGTTATTGGTCCTTTGAAACCAGGCACCACTTATTTCTACAGGTGTGGAGGGTCGGGCCCAGAGTTTTCTCTCAAGACACCTCCACACAACTTCCCTCTTGAATTTGTCGTCGTTGGTAAGTCATTGTCGTTGGGATTTGATATCAGTCTTTTGCTTCACCGTTTGGTTTGCTTCTGTCTGAGGGACTTGGGACAAACAGAATGGACTGCATCAACCTTGAAACATGTCGAAAGCAGGGAGTACGACGTTGCGTTGTTACCAGGAGATCTATCATACGCAGACTCCCAACAACCTTTGTGGGACTCCTTTGGTCGTTTGGTGGAACCCTATGCCAGTAAAAGGCCATGGATGGTTACTGAAGGCAACCACGAGATCGAGATTTTCCCCATTATTTACCCACAACCCTTCCAAGCCTACAATGCTCGTTGGCCTATGCCCTTCCAACAAAGTGCTTCCACCTCAAACCTCTATTACTCCTTCCAGCTTGTTGCCACCCATGTCATCATGCTAGGTTCCTACACTGACTTTCACGCCCAATCACAACAATACAACTGGCTCCAATCTGATCTCGCCAACATTGACAGGGCCAAGACACCTTGGCTCATTGTGTTGTTGCATGCACCTTGGTATAACACTAATGAGGCACACCAAGGTGAAGGTGAATCCATGAGACAAGCCATGGAACAATTGCTTTACAATGCCCGTGTTGACTTGGTTTTTGCTGGCCATGTTCATGCCTATGAACGCTTCACTCGAATTTACGATAACAAGGTTGACTCGTGTGGACCCATGTACGTCACCATTGGAGACGGAGGAAATCGAGAGGGGCTTGCGTTAATGTTTAAGAACCCTCCAAGCCCGCTCTCGTTGTATCGAGAACCAAGCTTCGGACATGGAAGGTTGAGAATAGTAAATGAAACACACGCACACTGGTCGTGGCACCGAAACAACGACACTGATGCAGTCGTAGCTGATGGCATTTGGATAGAGAGTTTAAGCAGCTCCCAAGCATGTTCGATACAACAAGATGATCCCAACGAAGAGCTATAA 1404 0.4751 MGRKCSRRSLMEFPILLIHTLFLLFFPLPLLSEHNNFVRQPAGQLIITPHQRSHSDPQQVHISLVGKEKMRVSWITEEKHAESVVEYGTESGEYSAKSTGEHTSYRYFLYNSGKIHNVVIGPLKPGTTYFYRCGGSGPEFSLKTPPHNFPLEFVVVGKSLSLGFDISLLLHRLVCFCLRDLGQTEWTASTLKHVESREYDVALLPGDLSYADSQQPLWDSFGRLVEPYASKRPWMVTEGNHEIEIFPIIYPQPFQAYNARWPMPFQQSASTSNLYYSFQLVATHVIMLGSYTDFHAQSQQYNWLQSDLANIDRAKTPWLIVLLHAPWYNTNEAHQGEGESMRQAMEQLLYNARVDLVFAGHVHAYERFTRIYDNKVDSCGPMYVTIGDGGNREGLALMFKNPPSPLSLYREPSFGHGRLRIVNETHAHWSWHRNNDTDAVVADGIWIESLSSSQACSIQQDDPNEEL 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g02355 467 Gene3D - 172 457 IPR029052 -
Vimu6g02355 467 Pfam Calcineurin-like phosphoesterase 188 365 IPR004843 GO:0016787
Vimu6g02355 467 SUPERFAMILY Metallo-dependent phosphatases 183 437 IPR029052 -
Vimu6g02355 467 Pfam Purple acid Phosphatase, N-terminal domain 57 140 IPR015914 GO:0003993|GO:0046872
Vimu6g02355 467 Gene3D - 56 148 - -
Vimu6g02355 467 CDD FN3 55 132 IPR003961 GO:0005515
Vimu6g02355 467 Pfam Iron/zinc purple acid phosphatase-like protein C 380 439 IPR025733 -
Vimu6g02355 467 PANTHER ACID PHOSPHATASE RELATED 24 452 IPR039331 GO:0003993
Vimu6g02355 467 SUPERFAMILY Purple acid phosphatase, N-terminal domain 48 146 IPR008963 GO:0003993|GO:0046872
Vimu6g02355 467 CDD MPP_PAPs 180 449 IPR041792 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g02355 Vimu-Chr6 20576568 20578503 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu6g02355 57 461 Miscellaneous Gene Families AT2G03450 25.370 1.89e-28 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g02355 K22390 - gmx:100819446 781.171
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g02355 6 20576568 20578503 Vimu6g02355 6 20576568 20578503 ECH