Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g02352 ATGAAATGTGCCAAATTAATATATGTTAAGAGTGATGGCAGAACCTGCACGGATGCACCTGATTTATTAATAATCTACTTTATTTTAGCTTTTTGTATTTTTCCTCTAAATTTAAATTATGTATTGCAGCATATTTTAAAGGAGGAGGAAACACTCTACCTTGGAAGACATTATAAATATGGAGCTAAGACATGGTTTCTAAGCAGGTCTATCAACTTGTATTCCTCAGTTTCACTCTCTAAACTTTGTTCTTTACCCTTATTTGTAATGGCAAGAATGCCTTTGGAACCTCTTATTGTGGGGAGAGTCATAGGAGAGGTTCTTGACTCTTTTACCACAACCACAAAAATGACTGTGACTTATAACAAAAAGCAAGTCTACAATGGCCATGAGTTTTTCCCTTCATCTATCAACATCAAACCCAAGGTTGAGATTGAGGGTGATGATATGAGATCCTTTTTCACACTGATCATGACAGACCCTGATGTTCCAGGCCCTAGTGACCCTTATCTGAGAGAACACTTGCACTGGATAGTGACAGACATTCCAGGCACAACAGATGCTACATTTGGGAAAGAGTTGGTGAGCTATGAGATCCCGAAACCTAATATTGGGATTCATAGGTTTGTGTTTGTCCTGTTCAAGCAAAAGCGTAGGCAGTGTGTTACTCCACCAACTTCAAGGGATCAGTTCAACACACGCAGTTTCGCAGCACAGAACGAGCTTGGGCTCCCAGTGGCTGCTGTCTACTTCAATGCACAGAGGGAAACGGCTGCAAGAAGACGCTAG 789 0.4081 MKCAKLIYVKSDGRTCTDAPDLLIIYFILAFCIFPLNLNYVLQHILKEEETLYLGRHYKYGAKTWFLSRSINLYSSVSLSKLCSLPLFVMARMPLEPLIVGRVIGEVLDSFTTTTKMTVTYNKKQVYNGHEFFPSSINIKPKVEIEGDDMRSFFTLIMTDPDVPGPSDPYLREHLHWIVTDIPGTTDATFGKELVSYEIPKPNIGIHRFVFVLFKQKRRQCVTPPTSRDQFNTRSFAAQNELGLPVAAVYFNAQRETAARRR 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g02352 262 ProSitePatterns Phosphatidylethanolamine-binding protein family signature. 154 176 IPR001858 -
Vimu6g02352 262 SUPERFAMILY PEBP-like 102 256 IPR036610 -
Vimu6g02352 262 Gene3D - 91 262 IPR036610 -
Vimu6g02352 262 PANTHER PHOSPHATIDYLETHANOLAMINE-BINDING PROTEIN 101 257 IPR035810 -
Vimu6g02352 262 FunFam Terminal flower 1 90 262 - -
Vimu6g02352 262 Pfam Phosphatidylethanolamine-binding protein 138 251 IPR008914 -
Vimu6g02352 262 CDD PEBP_euk 122 253 IPR035810 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g02352 Vimu-Chr6 20548386 20550388 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g02352 K06910 - pvu:PHAVU_001G189200g 336.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g02352 6 20548386 20550388 Vimu6g02352 6 20548386 20550388 ECH