Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g02347 ATGGCTACCTATTATGCACCTTCGAATGCTAGAAATTCAGCGGGGGTGCTGGCTGTTGTTGGAGGAAGAACAATTTCTGAGAATCACGGTGGCAGATCGTGCTCTTTGAAAATTCAAGAGAGCAAGTACGTGTTTGGCAGCAGTAGAAAGTGTGGTTCGATTCAAGTGAAGTGCTCCACGAATTCCCATAGTATCAGTCGCAAGGATCCTTTTCTGGATCTGCACCCTGAGGTTTCAATGCTTAGAGGAGAAGGAGGGAGTGCATTGAATAACCCTGGACCTAGAATATCAGGTGGAAAGGTGGCTGAAAGCTTAGAAACCACCATGAATCCAAGTAACTATAATGAAGCTAAGATCAAAGTCATTGGTGTGGGTGGAGGTGGGTCAAATGCAGTCAATCGTATGATAGAGAGTTCCATGAATGGCGTGGAATTCTGGATTGTTAATACTGATATTCAGGCCATGAGAATGTCACCAGTCACTCCTCAGAACCGGTTGCAAATCGGTGAGGAGCTTACGCGCGGTCTTGGCGCTGGTGGTAACCCTGAGATTGGTATGAATGCTGCCAAGGAAAGCAAGGAATCAATACAGGAGGCAGTTTATGGAGCTGACATGGTCTTTGTCACTGCCGGAATGGGTGGAGGAACTGGCACTGGCGGAGCTCCAGTTATTGCTGGTATCACAAAGTCAATGGGTATACTGACTGTTGGTATTGTCACAACTCCCTTTTCTTTTGAAGGACGAAGACGGGCAGTTCAAGCACAAGAAGGAATTGCAGCCTTAAGAGATAATGTTGATACACTGATAGTTATTCCAAATGATAAACTGCTGACTGCAGTTTCTCAATCTACCCCTGTAACTGAAGCATTCAATCTGGCTGATGATATTCTTCGACAAGGTGTACGTGGTATATCTGATATTATTACGATACCAGGATTGGTGAATGTCGACTTTGCTGATGTTCGAGCTATAATGGCCAATGCAGGTTCTTCACTTATGGGGATAGGAACTGCAACTGGGAAAACAAGGGCAAGAGATGCTGCGTTAAATGCCATCCAATCACCTTTACTAGATATTGGCATAGAAAGGGCAACTGGAATCGTATGGAACATAACTGGTGGAAGTGATTTGACCTTATTTGAGGTAAATGCTGCAGCTGAAGTTATATATGATCTTGTGGATCCCACTGCTAATTTGATATTTGGAGCAGTAATAGATCCATCACTCAGTGGTCAAGTAAGCATAACACTAATTGCAACTGGATTCAAGCGTCAAGAGGAAAGTGAAGGGAGGCCTACACAGGGCAGTCAACTCATACAAGGAGAAACCATTGGTATCAATAGGCGGTCTTCCTCTTTCACTGATGGTGGTTTTGTTGAGATTCCTGAATTCTTAAAGAAGAAGGGGCGCTCACGTTATCCAAGAGTTTAA 1431 0.4423 MATYYAPSNARNSAGVLAVVGGRTISENHGGRSCSLKIQESKYVFGSSRKCGSIQVKCSTNSHSISRKDPFLDLHPEVSMLRGEGGSALNNPGPRISGGKVAESLETTMNPSNYNEAKIKVIGVGGGGSNAVNRMIESSMNGVEFWIVNTDIQAMRMSPVTPQNRLQIGEELTRGLGAGGNPEIGMNAAKESKESIQEAVYGADMVFVTAGMGGGTGTGGAPVIAGITKSMGILTVGIVTTPFSFEGRRRAVQAQEGIAALRDNVDTLIVIPNDKLLTAVSQSTPVTEAFNLADDILRQGVRGISDIITIPGLVNVDFADVRAIMANAGSSLMGIGTATGKTRARDAALNAIQSPLLDIGIERATGIVWNITGGSDLTLFEVNAAAEVIYDLVDPTANLIFGAVIDPSLSGQVSITLIATGFKRQEESEGRPTQGSQLIQGETIGINRRSSSFTDGGFVEIPEFLKKKGRSRYPRV 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g02347 476 Pfam FtsZ family, C-terminal domain 329 423 IPR024757 -
Vimu6g02347 476 Hamap Cell division protein FtsZ [ftsZ]. 114 445 IPR000158 GO:0003924|GO:0005525
Vimu6g02347 476 FunFam Cell division protein FtsZ 109 327 - -
Vimu6g02347 476 Pfam Tubulin/FtsZ family, GTPase domain 118 279 IPR003008 GO:0005525
Vimu6g02347 476 ProSitePatterns FtsZ protein signature 2. 204 225 IPR020805 GO:0005525
Vimu6g02347 476 FunFam Cell division protein ftsZ, putative 328 436 - -
Vimu6g02347 476 Gene3D - 328 438 IPR037103 -
Vimu6g02347 476 PRINTS Cell division protein FtsZ signature 296 318 IPR003008 GO:0005525
Vimu6g02347 476 PRINTS Cell division protein FtsZ signature 205 225 IPR003008 GO:0005525
Vimu6g02347 476 PRINTS Cell division protein FtsZ signature 233 254 IPR003008 GO:0005525
Vimu6g02347 476 PRINTS Cell division protein FtsZ signature 319 340 IPR003008 GO:0005525
Vimu6g02347 476 CDD FtsZ_type1 129 421 IPR000158 GO:0003924|GO:0005525
Vimu6g02347 476 NCBIfam cell division protein FtsZ 111 433 IPR000158 GO:0003924|GO:0005525
Vimu6g02347 476 SUPERFAMILY Tubulin nucleotide-binding domain-like 117 315 IPR036525 -
Vimu6g02347 476 SMART Tubulin_C_4 314 431 IPR018316 -
Vimu6g02347 476 SUPERFAMILY Tubulin C-terminal domain-like 311 425 IPR008280 -
Vimu6g02347 476 PANTHER CELL DIVISION PROTEIN FTSZ-RELATED 58 431 IPR045061 GO:0003924|GO:0005525
Vimu6g02347 476 Gene3D Tubulin/FtsZ, GTPase domain 107 327 IPR036525 -
Vimu6g02347 476 SMART Tubulin_4 118 312 IPR003008 GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g02347 Vimu-Chr6 20497626 20504272 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g02347 K03531 - gmx:100793382 833.943
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g02347 6 20497626 20504272 Vimu6g02347 6 20497626 20504272 ECH