Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g02340 ATGTTTCCTTTTTGCAACCTTTCTCCTCTTTCTCTGCAACCGGGCATGGTGATTCAGGTTCCCGGAAAACCTACCGGACAGTCTTCGTTTCTCTCTGTCACCAACTCCTCGTCTTCCGGCGAGAGAATCAACACGCGCCCAAGTACCATTTCGCCATTCGAATCCCGAATCTCACTCGTTTTCGCTCTCGCTTCTCAAGCCAACTCTCTCAGCCAGCGACTTCTAGCTGATGTCGCTGCCGAGACAGCCAAATACTTGGTTCCGAAGAGATTCGAAAGCCGTAATCTCGAGGAGGGGTTGATGAGTGTTCCGGACCTTGAGACTGTAGAGTTCAAAGTTTTGTGCAGAAGGGACCAGTATGAGATTCGGGAAGTTGAGCCTTACTTTGTGGCTGAGACAACAATGCCTGGGAAGAGGGGATTTGATTTCAATGGTGCTTCTCGGTCCTTTAATGTCTTAGCTGAGTACCTTTTCGGTAAGAATACAAAGAATGAGAAAATGGAGATGACTACACCTGTTTTCACAAGTAAGAATCAATCTGATGGGGTTAAAATGGATATGACAACTCCTGTGTTAACAACAAAGATTGAAGATCAAGATAAGTGGAGAATGTCTTTCGTCATGCCATCGAAGTATGGTGCTAACTTGCCACTGCCTAAAGATTCTTCTGTGACAATTAAAGAGGTGTCCAGAAAAATAGTTGCTGTAGTTGCCTTTTCAGGTTTTGTGAATGATGAAGAAATTAAGCAGCGCGAACTGAAACTACGAGAAGCTTTAAAAAGTGATAGTCAGTTTAAGATTAAAGAAGGAACTTCAGTAGAAGTTGCACAGTATAATCCACCATTTACTCTTCCATTTCAACGACGTAATGAGATTGCATTGGAGGTGGAATGGAATAATAAGTAG 906 0.4338 MFPFCNLSPLSLQPGMVIQVPGKPTGQSSFLSVTNSSSSGERINTRPSTISPFESRISLVFALASQANSLSQRLLADVAAETAKYLVPKRFESRNLEEGLMSVPDLETVEFKVLCRRDQYEIREVEPYFVAETTMPGKRGFDFNGASRSFNVLAEYLFGKNTKNEKMEMTTPVFTSKNQSDGVKMDMTTPVLTTKIEDQDKWRMSFVMPSKYGANLPLPKDSSVTIKEVSRKIVAVVAFSGFVNDEEIKQRELKLREALKSDSQFKIKEGTSVEVAQYNPPFTLPFQRRNEIALEVEWNNK 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g02340 301 PANTHER HEME-BINDING PROTEIN-RELATED 74 175 IPR006917 -
Vimu6g02340 301 SUPERFAMILY Probable bacterial effector-binding domain 177 296 IPR011256 -
Vimu6g02340 301 Gene3D Regulatory factor, effector binding domain 180 301 IPR011256 -
Vimu6g02340 301 Gene3D Regulatory factor, effector binding domain 105 179 IPR011256 -
Vimu6g02340 301 Pfam SOUL heme-binding protein 106 175 IPR006917 -
Vimu6g02340 301 Pfam SOUL heme-binding protein 177 294 IPR006917 -
Vimu6g02340 301 SUPERFAMILY Probable bacterial effector-binding domain 101 177 IPR011256 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g02340 - - gmx:100797412 506.138
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g02340 6 20459835 20462988 Vimu6g02340 6 20459835 20462988 ECH