Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g02338 ATGGGCTGCGTCTCTTCAAAACTCGTAAAGAAAGAAATCAAGCAAGAACAACTCACTGTCACCAATGGCGGCGGTTACACCAATCACGTGGTATCCCTCACTTCATCCACCTATGGAGCACTGATGTTGGACAAGGAGAAGGAGCAGCACCTACCCACAGATGAAGATTCCAAAACGGACAAAACATCTCCTCTCAGGAACCGCGAAGAACCCGAAGTGATCAACGCTTGGGAACTCATGGAGGGTCTCGAAGAGGGAGTGCCCATTTCAAATCACCCAAGGAAAAGCCCCAAGTCCACACCTTTCCTTCGTGGGTTCCTCGCTACTGACACCAAAACCCCATTGAAGTTTCTCAACCAATTTGGGTCACCCAAGAGTCTTAAGAAGTTCACAGGGAAGGAGAACAAGGCTCAGCAAGGTCAATCCAATGGCGGTGTAAGACGCTTGGATTACAATTTTAGTCCAAAGGGGATCCTCAAACCCTCTAATTTTTCTTCTCCCTTAAAAGGGTCTCCGATACGTCCTCGAAGAAACAGTTTCGGCAGTGATACGAAGAGGAGGAGTCCTAGCCCTCTGTTTGACCCAGAGCTTCTCGCCTCCTACGAAAAAGAACTCACCGAAGAGGAAGAACAGATCAAGAGAATGGTGTGGGCCACCCCCAAAACCAGAAGAGTCAGAAAATCTTTGGACTCGCAAACTTTTGTTAACACCTTTGAGGAAAAGTGTCCTCCCAAAGGGGAAAATTGCATTGTCATTTACACCACCACGCTGCGAGGAATCAGAAAGACGTATGAGGAATGCAATAAGGTTAGGTCCATTGTTGAGTCATATTGCGTGCACGTGATTGAGCGAGACGTGTCAATGGATTCGGGGTTCAAGGAGGAGTTGCGGAAGCTGATGGAGACAAAGCAAGTTAAGGTTCCGGTTGTGTTTGTGAAAGGAAGGTTGGTTGGGGGAGCTGAGGAAGTTGTGAAGTTGGAAGAAGAGGGGAAGTTGGGTGTTCTCTTTGATGGGATTCCTCAGAAGACGACGGGTGACTGTGAAGGGTGTGGTGGAGTGAGGTTTGTGATGTGTGCGGAGTGTAATGGAAGTTGTAAGGTTTTGGACGACGAATGCAAGAAGAATGTGAGGTGTGGTCACTGCAATGAGAATGGACTGGTTCAATGCCCTTTGTGTCGTTAA 1182 0.4797 MGCVSSKLVKKEIKQEQLTVTNGGGYTNHVVSLTSSTYGALMLDKEKEQHLPTDEDSKTDKTSPLRNREEPEVINAWELMEGLEEGVPISNHPRKSPKSTPFLRGFLATDTKTPLKFLNQFGSPKSLKKFTGKENKAQQGQSNGGVRRLDYNFSPKGILKPSNFSSPLKGSPIRPRRNSFGSDTKRRSPSPLFDPELLASYEKELTEEEEQIKRMVWATPKTRRVRKSLDSQTFVNTFEEKCPPKGENCIVIYTTTLRGIRKTYEECNKVRSIVESYCVHVIERDVSMDSGFKEELRKLMETKQVKVPVVFVKGRLVGGAEEVVKLEEEGKLGVLFDGIPQKTTGDCEGCGGVRFVMCAECNGSCKVLDDECKKNVRCGHCNENGLVQCPLCR 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g02338 393 CDD GRX_GRX_like 250 389 - -
Vimu6g02338 393 MobiDBLite consensus disorder prediction 126 193 - -
Vimu6g02338 393 MobiDBLite consensus disorder prediction 46 69 - -
Vimu6g02338 393 SUPERFAMILY Thioredoxin-like 243 336 IPR036249 -
Vimu6g02338 393 Coils Coil 198 218 - -
Vimu6g02338 393 PANTHER GLUTAREDOXIN DOMAIN-CONTAINING CYSTEINE-RICH PROTEIN CG12206-RELATED 27 392 - -
Vimu6g02338 393 ProSiteProfiles Glutaredoxin domain profile. 238 343 - -
Vimu6g02338 393 Pfam Glutaredoxin 250 317 IPR002109 -
Vimu6g02338 393 Gene3D Glutaredoxin 246 337 - -
Vimu6g02338 393 MobiDBLite consensus disorder prediction 133 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g02338 Vimu-Chr6 20438712 20441632 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g02338 K17479 - gmx:100781497 638.647