Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g02321 ATGTTATCAGCTCTGATGTATGTGCTTGTACCTATGCCTTGCTTATTCTTTGGAGGTGGATCCACTCAATTTCTAATGAGCCGTGATGGTGGGGGATCAGAAAAGCTGTCTGATTTATGTAGAAACAATTTCCATGCGATTGGCTTTTGGGTTACTGGTATTCTGTTGTATAGCTGTATGCATTGCAATTGTTGGATAGATGCTGCAAAATTTTTGACTGGAGCATCAGCCGTTGGGAGCATAGCCATTCCTATAATCCTCAAGCATGCACATATGATTGAGACAGGCGCGATGCTCATTGAGCTTGTATCGTTCTTCATATTTATATGTACTGTTTTATGTTTCCACCAAGCCAACCTTGATGATGATTGGTAA 375 0.408 MLSALMYVLVPMPCLFFGGGSTQFLMSRDGGGSEKLSDLCRNNFHAIGFWVTGILLYSCMHCNCWIDAAKFLTGASAVGSIAIPIILKHAHMIETGAMLIELVSFFIFICTVLCFHQANLDDDW 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g02321 124 Pfam Vacuolar protein sorting 55 63 118 IPR007262 -
Vimu6g02321 124 PANTHER LEPTIN RECEPTOR-RELATED 1 123 IPR007262 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g02321 Vimu-Chr6 20300776 20303062 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu6g02321 1 115 EF-hand Containing Proteins AT1G32410 42.609 2.66e-21 81.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g02321 - - pvu:PHAVU_001G192100g 173.326
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g02321 6 20300776 20303062 Vimu6g02321 6 20300776 20303062 ECH