Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g02317 ATGCCGGCGATTTTGGACGGTGCAATTCGGCGAGCTGTTGTGATCAGTAACGGGTTCGCTGGCGCTGAGAATCAGTGCATTGGTTTGGTTCGTGCTCTTGGTTTCTCCAACTGCCACACCATATACCGTGTCACGAGGCCTCGAGGAGGAATCAATCGGTGGCTTCAATGGCTTCCGGTTTCGGTTCACAAAAAGTTAGAGTCCGTTGTTAGAATGAGCTGTGGCAAATCGAGCTTACGAACGCCTCACACTATCGGCTTATCCAACGTGTTGGAAGCTGATGCTTACCACCTTGCCACCACGGCTCGCGAAACGTTTCACAAAGGCGGACCCTTGTTGGTGGTTGCATCTGGACGAGACACCATTTCTGTTGCCAGCTCCATTAAACGGTTAGCTCCAGAAAATGTTTTTCTAGTTCAGATACAACATCCAAGATTTCACCTGAATAGGTTTGATCTTGTGATCACTCCACGCCATGATTATTATCCGCAGACTCCACACGCCCAGCAGCAAATACCTCGGTTTCTTCGAAGGTGGGTGACTCCATGGGAACCTCCAGGCCGCAATGTGGTCCTCACTGTGGGAGCACTTCATCAAGCTGATTCCGCTGCTCTTAGGGTTGCCGCTTCTGCCTGGCATAAGGAGTTAGGAACTCTACCAAAGCCCTTGCTTGTGGTTAATGTTGGGGGACCTACTGGCAATTGTCCCTATGGTGTAGATTTTGTAAAGAAGTTAGTGGTTATGCTTCAGAGTGTTCTGTGGAGTTGTGGGAGTATCAAGATATCTTTCTCCAGAAGAACTCCTGACAAGATCAGCAAAATTTTGGTTAAAGAATTTTCCACAAATCCCAAGGTCCAAATATGGGACGGTGAAGGTCCAAATCCACATATGGGACATCTAGCCTGGGCTGATGCCTTTGTTATCACAGCTGATTCAGTTAGTATGTTGAGTGAGGCCTGCAGTACTGGGAAGCCTGTGTATGTAGTTGGAGCAGAGCTGTGTACTTGGAAGTTTGCTGACTTCCAAAATTCTTTGCAAAAACATGGGGTAGCTCGACCATTCACTGGAAAGGAGAATGTGAGTTGCCATTTGAAACACAAAGGTGATCCCATTTCTCTCACCTTGAATCATCCGGAGAAAGACCCTGCCATTGGACCAATACCAAAAGTTGAGATAACCGAAAGCTGGAGTTATCCTCCACTGAATGACACTGCAGAGGCTTCACGCCAAGTAATTGCTGCTCTTGCTCAGCGAGGATGGACCATACACCCATAA 1275 0.4784 MPAILDGAIRRAVVISNGFAGAENQCIGLVRALGFSNCHTIYRVTRPRGGINRWLQWLPVSVHKKLESVVRMSCGKSSLRTPHTIGLSNVLEADAYHLATTARETFHKGGPLLVVASGRDTISVASSIKRLAPENVFLVQIQHPRFHLNRFDLVITPRHDYYPQTPHAQQQIPRFLRRWVTPWEPPGRNVVLTVGALHQADSAALRVAASAWHKELGTLPKPLLVVNVGGPTGNCPYGVDFVKKLVVMLQSVLWSCGSIKISFSRRTPDKISKILVKEFSTNPKVQIWDGEGPNPHMGHLAWADAFVITADSVSMLSEACSTGKPVYVVGAELCTWKFADFQNSLQKHGVARPFTGKENVSCHLKHKGDPISLTLNHPEKDPAIGPIPKVEITESWSYPPLNDTAEASRQVIAALAQRGWTIHP 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g02317 424 PANTHER OS02G0535700 PROTEIN 8 423 IPR009367 -
Vimu6g02317 424 Pfam Mitochondrial fission ELM1 20 415 IPR009367 -
Vimu6g02317 424 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 104 330 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g02317 Vimu-Chr6 20260641 20265510 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g02317 - - gmx:100801126 696.427
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g02317 6 20260641 20265510 Vimu6g02317 6 20260641 20265510 ECH