Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g02311 ATGGCAATTCAATTGCACTTCACACTCATATTCTTTTCTCTGTTTTTGGTGTCCTCTTTCACCTTTCCTCTGCCCCCTATTCTACCCAGATTTCCCTCTTCAATAGTCAGTGCAGAGCTAAAGCAACGCTCTCATTCTGCTCCAAATACCCCATACAGAACCAAGTTCTTCACTCAAATACTCGATCACTTCAATTTCAATCCCCAGAGCAATCACCTTTTTCAACAAAGGTATCTCATCAATGATACCTTCTGGGGTGGTGCCAAAAACAATGCTCCAATCTTTGTCTACACGGGAAATGAAGGGAACATAGAATGGTTCACTCAGAACACAGGCTTCATGTTCGAAAATGCTCCTTCTTTTCATGCCCTTTTGCTTTTTATTGAGCATAGATTCTACGGAAAATCAATACCATTTGGGGGAAACAGGAAGCTTGCATACGCAAATGCTACCACACTGGGGTATTTGAGCTCCACACAGGCATTAGCTGATTATGCCACTCTCATCATTGATTTGAAGAAGAATTTGTCAGCAACTGATTCTCCCGTTGTGGTGTTTGGAGGATCCTATGGAGGAATGTTGGCAGCTTGGTTCAGGATGAAGTATCCACACGTTGCAATTGGAGCTCTGGCATCCTCTGCTCCCATTCTCCATTTCATGGATTTGGTTTCACCAGATATCTTCAACAGCATCATCTCGCAAGATTTCAGAAGCGAGAGTGAGAATTGTTACAAAGTGTTAAAAGGGTCATGGAAACTAATAGAGCACACGGCCAACAAACCCGGGGGACTGGAACTGTTACAGAAATCATTCAGAATTTGCAAAAGCAATGATTTTGGGGCAGGTTCTCTGGAAGGATGGCTTAGGACGGCGTGGGTGTATACAGCTATGACAGATTATCCCACACCATCCAATTTCCTCAATCCCTTGCCAGCATATCCCATAAAAAAGATGTGTGAGGCCATAGAAGGGACAAGAAAGGAAAAAAATGATGAATTGGAGAAGTTGTATGCAGCAGTGAGTATATTCTACAACCATACAGGCACTGCCACGTGTTTCGATTTGGATGATGATTCAGACCCTCACGATCTCGGGGGATGGCAATGGCAGGCGTGTACGGAGATGATAATGCCCGTAGGTGGAAGCAATAAGCACAGCATATTCCCAGAATATAAGTGGTCATACGAAGACAGAGAGTCTGCATGCCAATATTTCTACAATGTTACGCCTAGACCACACTGGATTACCACTGAGTTTGGTGGCCATGCTATTCAGACAGTTCTGAAAAGCTCTGCAAGCAACATTATATTCTTCAATGGTTTAAGAGATCCTTGGAGTGGTGGAGGGGTGTTAAAGAATATATCAAAATCAATAGTTGCTCTTGTTGAAAAAAGAGGAGCTCATCATGTAGACTTAAGGTACTCCACTAAGGAAGATCCAAAGTGGCTTAAAGATGTAAGGAGACAGGAGGTAAAGATCATTGCAAGTTGGATCTCACAATACTATCAAGACCTACACTCCAATAACTGA 1530 0.4288 MAIQLHFTLIFFSLFLVSSFTFPLPPILPRFPSSIVSAELKQRSHSAPNTPYRTKFFTQILDHFNFNPQSNHLFQQRYLINDTFWGGAKNNAPIFVYTGNEGNIEWFTQNTGFMFENAPSFHALLLFIEHRFYGKSIPFGGNRKLAYANATTLGYLSSTQALADYATLIIDLKKNLSATDSPVVVFGGSYGGMLAAWFRMKYPHVAIGALASSAPILHFMDLVSPDIFNSIISQDFRSESENCYKVLKGSWKLIEHTANKPGGLELLQKSFRICKSNDFGAGSLEGWLRTAWVYTAMTDYPTPSNFLNPLPAYPIKKMCEAIEGTRKEKNDELEKLYAAVSIFYNHTGTATCFDLDDDSDPHDLGGWQWQACTEMIMPVGGSNKHSIFPEYKWSYEDRESACQYFYNVTPRPHWITTEFGGHAIQTVLKSSASNIIFFNGLRDPWSGGGVLKNISKSIVALVEKRGAHHVDLRYSTKEDPKWLKDVRRQEVKIIASWISQYYQDLHSNN 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g02311 509 SUPERFAMILY alpha/beta-Hydrolases 111 472 IPR029058 -
Vimu6g02311 509 Gene3D Serine carboxypeptidase S28, SKS domain 224 392 IPR042269 -
Vimu6g02311 509 Pfam Serine carboxypeptidase S28 59 488 IPR008758 GO:0006508|GO:0008236
Vimu6g02311 509 PANTHER PROTEASE S28 PRO-X CARBOXYPEPTIDASE-RELATED 37 504 - -
Vimu6g02311 509 Coils Coil 319 339 - -
Vimu6g02311 509 Gene3D alpha/beta hydrolase 56 498 IPR029058 -
Vimu6g02311 509 FunFam Dipeptidyl peptidase 7 224 391 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g02311 Vimu-Chr6 20199644 20204494 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g02311 K01285 - gmx:100781698 871.692
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g02311 6 20199644 20204494 Vimu6g02311 6 20199644 20204494 ECH